Non-Coding RNA Search

Pig2-102D16

Sequence:


               
               AGAGGAAGGAGCCCTTGGGAGCCGGGCCCCCCACACGCCATGGCCAGCGTGGTGGTGAAG
ACGATCTGGCAGTCCAAGGAGATCCATGAGGCCGGGGATCCCCCTGCGGGGGTCGAGAGC
CGCTCCCAGCTGGTCCCCGAGGCTCCTGGGGTGGCCAGCCCCGTCAAGGGGATCGCGAAG
AAAAAGAAGGCCGTGTCCTTCCTCGGGGTGGAGCCTCGGATGTCCCACGAGCCAATGCAC
TGGTGCCTGAACCTCAGACGGTCCTCCGCCTGCACCAATGTGTCTCTGCTCAACCTGGCC
ACCATGGAGCCCACCGACTCTTCGGGGACAGACTCAATCACGGAAGACAGCGGCCTGCTG
GCACTGCCCGTGCCCCCTGCCTCCCCCACCCCGCCCTGGGCTCCAGATGACCCAGACATC
ACGGAAATACTGAGTGGGGTCAACAGTGGATTGGTCCGCGCCAAAGACTCCATCACCAGC
TTGAAAGAGAAGACCACCCGCGTTAACCAGCACGTGCAGTCGCTACAGAGTGAGTGTTCC
GTGCTGAGTGAGAATCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGAGGAAGGAGCCCTTGGGAGCCGGGCCCCCCACACGCCATGGCCAGCGTGGTGGTGAAG
ACGATCTGGCAGTCCAAGGAGATCCATGAGGCCGGGGATCCCCCTGCGGGGGTCGAGAGC
CGCTCCCAGCTGGTCCCCGAGGCTCCTGGGGTGGCCAGCCCCGTCAAGGGGATCGCGAAG
AAAAAGAAGGCCGTGTCCTTCCTCGGGGTGGAGCCTCGGATGTCCCACGAGCCAATGCAC
TGGTGCCTGAACCTCAGACGGTCCTCCGCCTGCACCAATGTGTCTCTGCTCAACCTGGCC
ACCATGGAGCCCACCGACTCTTCGGGGACAGACTCAATCACGGAAGACAGCGGCCTGCTG
GCACTGCCCGTGCCCCCTGCCTCCCCCACCCCGCCCTGGGCTCCAGATGACCCAGACATC
ACGGAAATACTGAGTGGGGTCAACAGTGGATTGGTCCGCGCCAAAGACTCCATCACCAGC
TTGAAAGAGAAGACCACCCGCGTTAACCAGCACGTGCAGTCGCTACAGAGTGAGTGTTCC
GTGCTGAGTGAGAATCT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               2-194, - strand, RNAz p=0.702749

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               2-194, - strand, RNAz p=0.702749

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               2-207, gnl|bosTau2|chr18 (48816859-48816651)
               

               
               2-207, gnl|Hg17|chr19 (54958355-54958146)
               

               
               2-207, gnl|Mm7|chr7 (41117780-41117975)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-207, gnl|bosTau2|chr18 (48816859-48816651)
               

               
               2-207, gnl|Hg17|chr19 (54958355-54958146)
               

               
               2-207, gnl|Mm7|chr7 (41117780-41117975)

	2-207, gnl\|bosTau2\|chr18 (48816859-48816651)
	2-207, gnl\|Hg17\|chr19 (54958355-54958146)
	2-207, gnl\|Mm7\|chr7 (41117780-41117975)