Non-Coding RNA Search

Pig2-102J21

Sequence:


               
               TTTCTTAGCAAGTGCCACCTGGGGGAGGACACAAAGGCATTTAAATAACTCCGACATGAC
CATCACCATAATAGAACCTTTGAGGCTGATCATGCTCTGCTTTGGGACCTAAGAAGGGCT
TCACTTTTGAACTGGAGCATGAATCTAACTGAGCCAGGTGGAGAAGGGGGAGGGTGGCGA
CTTGGATGCTCCCTGCCCTCATCTTTGTCATTTGCTGGTTAAGAAAATCTTAAGAGTGAG
TCATTAATTCCTGCCTACAGAGGTGGCGGTGGTCTAGAAAGTTTGGCTGAGGGCCTCCTC
TACCCCCCACCAAAATGCTCGGAAGACTTTCTTATGTGCATCATCTTTTTAGGATGTTTT
CTTCTGGAGAAAGCGAAGGAAGAGAGTAAAAGTGATGGGTAAGTGCCCTATGATGTGTCA
TGAGCCTGAACCCTTGGGGTTTCCCTCAGGAAGAGTGAGACCCATCACTCGAGAGCTGGG
TGACCATGTGACAGTCGCTTGGTCTCTCTGTGGAAAGGGGGACTTGGCAAATGTGACCTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTCTTAGCAAGTGCCACCTGGGGGAGGACACAAAGGCATTTAAATAACTCCGACATGAC
CATCACCATAATAGAACCTTTGAGGCTGATCATGCTCTGCTTTGGGACCTAAGAAGGGCT
TCACTTTTGAACTGGAGCATGAATCTAACTGAGCCAGGTGGAGAAGGGGGAGGGTGGCGA
CTTGGATGCTCCCTGCCCTCATCTTTGTCATTTGCTGGTTAAGAAAATCTTAAGAGTGAG
TCATTAATTCCTGCCTACAGAGGTGGCGGTGGTCTAGAAAGTTTGGCTGAGGGCCTCCTC
TACCCCCCACCAAAATGCTCGGAAGACTTTCTTATGTGCATCATCTTTTTAGGATGTTTT
CTTCTGGAGAAAGCGAAGGAAGAGAGTAAAAGTGATGGGTAAGTGCCCTATGATGTGTCA
TGAGCCTGAACCCTTGGGGTTTCCCTCAGGAAGAGTGAGACCCATCACTCGAGAGCTGGG
TGACCATGTGACAGTCGCTTGGTCTCTCTGTGGAAAGGGGGACTTGGCAAATGTGACCTC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               364-481, - strand, RNAz p=0.890932

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               364-481, - strand, RNAz p=0.890932

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               5-540, gnl|bosTau2|chr2 (45450950-45450415)
               

               
               5-540, gnl|Hg17|chr2 (121216899-121217585)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-540, gnl|bosTau2|chr2 (45450950-45450415)
               

               
               5-540, gnl|Hg17|chr2 (121216899-121217585)

	5-540, gnl\|bosTau2\|chr2 (45450950-45450415)
	5-540, gnl\|Hg17\|chr2 (121216899-121217585)