Pig2-102M15
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AACACCTTTCAGATGTGGCTGCCCAGTTTTCCTTCATAGTCAGATGCTTTGGGAGCTGGT GCTGTTGGGTGAACCTCTTGTGGTCATGGCACCGTCACCATCAGAGTCGTCAGAGACCGT ATTGGCACTTGTTAACTGTATTTCTCCATTAAAGTACTTCAGTGATTTCCGACCTTATTT CACTATTCATGATAGTGAATTCAAAGAATATACCACCCGTACTCAAGCCCCGCCTTCAGT CATATTAGGAGTAACCAACCCTTTTTTTGCAAAAACACTCCAGCACTGGCCACACATTAT TCGAATAGGAGACCTTAAACCTGCAGGTGAAATTCCTAAGCAGGTTAAAGTGAAAAAACT GAAGAACCTAAAGACTCTGGATTCTAAACCTGGAGTTTATACATCTTATAAGCCATATCT AAATAGAGATGAAGAGATCATAAAACAATTACAGAGGGGTGTACAACAGAAGCGTCCTTC TGAGGCTCAAAGTGTTATTCTCCGACGCTATTTTTTGGAACTGACACAAAGCTTCATTAT CCCATTAGTAAGTCAGCATATGTATTTGCTTAATGTAATGATTTATTAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AACACCTTTCAGATGTGGCTGCCCAGTTTTCCTTCATAGTCAGATGCTTTGGGAGCTGGT GCTGTTGGGTGAACCTCTTGTGGTCATGGCACCGTCACCATCAGAGTCGTCAGAGACCGT ATTGGCACTTGTTAACTGTATTTCTCCATTAAAGTACTTCAGTGATTTCCGACCTTATTT CACTATTCATGATAGTGAATTCAAAGAATATACCACCCGTACTCAAGCCCCGCCTTCAGT CATATTAGGAGTAACCAACCCTTTTTTTGCAAAAACACTCCAGCACTGGCCACACATTAT TCGAATAGGAGACCTTAAACCTGCAGGTGAAATTCCTAAGCAGGTTAAAGTGAAAAAACT GAAGAACCTAAAGACTCTGGATTCTAAACCTGGAGTTTATACATCTTATAAGCCATATCT AAATAGAGATGAAGAGATCATAAAACAATTACAGAGGGGTGTACAACAGAAGCGTCCTTC TGAGGCTCAAAGTGTTATTCTCCGACGCTATTTTTTGGAACTGACACAAAGCTTCATTAT CCCATTAGTAAGTCAGCATATGTATTTGCTTAATGTAATGATTTATTAAA |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 475-590, + strand, RNAz p=0.81419 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 475-590, + strand, RNAz p=0.81419 |
| Aligned organism(s): 40 entry(ies) | More info |
| Aligned organism(s): 40 entry(ies) | Help | Less info |
| 1-138, gnl|bosTau2|chr22 (33431785-33431922) | |
| 1-138, gnl|canFam2|chr20 (35810344-35810197) | |
| 1-138, gnl|danRer3|chrNA (103256946-103257089) | |
| 1-138, gnl|dasNov1|scaffold_63169 (4071-3921) | |
| 1-138, gnl|echTel1|scaffold_308945 (2909-2771) | |
| 1-138, gnl|fr1|chrUn (266787190-266787055) | |
| 1-138, gnl|galGal2|chr12 (8804131-8804273) | |
| 1-138, gnl|hg17|chr3 (57607082-57607231) | |
| 1-138, gnl|Hg17|chr3 (57607216-57607080) | |
| 1-138, gnl|loxAfr1|scaffold_12322 (25120-25258) | |
| 1-138, gnl|mm7|chr14 (23998982-23998834) | |
| 1-138, gnl|Mm7|chr14 (23998847-23998982) | |
| 1-138, gnl|monDom2|scaffold_5 (2559133-2559263) | |
| 1-138, gnl|oryCun1|scaffold_195781 (20563-20713) | |
| 1-138, gnl|panTro1|chr2 (59329665-59329814) | |
| 1-138, gnl|rheMac2|chr2 (78750161-78750012) | |
| 1-138, gnl|rn3|chr16 (1923468-1923320) | |
| 1-138, gnl|tetNig1|chrUn_random (19096577-19096444) | |
| 1-138, gnl|xenTro1|scaffold_80 (1927845-1927998) | |
| 232-335, gnl|bosTau2|chr22 (33434539-33434642) | |
| 232-335, gnl|canFam2|chr20 (35814014-35813877) | |
| 232-335, gnl|danRer3|chrNA (103252286-103252387) | |
| 232-335, gnl|echTel1|scaffold_275008 (977-828) | |
| 232-335, gnl|fr1|chrUn (266787631-266787515) | |
| 232-335, gnl|galGal2|chr12 (8801121-8801235) | |
| 232-335, gnl|hg17|chr3 (57602405-57602550) | |
| 232-335, gnl|Hg17|chr3 (57602514-57602407) | |
| 232-335, gnl|loxAfr1|scaffold_12322 (19685-19828) | |
| 232-335, gnl|mm7|chr14 (24002845-24002717) | |
| 232-335, gnl|Mm7|chr14 (24002734-24002841) | |
| 232-335, gnl|monDom2|scaffold_5 (2549600-2549752) | |
| 232-335, gnl|oryCun1|scaffold_195781 (17978-18115) | |
| 232-335, gnl|panTro1|chr2 (59324916-59325061) | |
| 232-335, gnl|rheMac2|chr2 (78755300-78755160) | |
| 232-335, gnl|rn3|chr16 (1927639-1927511) | |
| 232-335, gnl|tetNig1|chrUn_random (19096909-19096822) | |
| 232-335, gnl|xenTro1|scaffold_80 (1925508-1925624) | |
| 457-590, gnl|bosTau2|chr22 (33439910-33440043) | |
| 457-590, gnl|Hg17|chr3 (57594122-57593987) | |
| 457-590, gnl|Mm7|chr14 (24010081-24010200) |
| Aligned organism(s): 40 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-138, gnl|bosTau2|chr22 (33431785-33431922) | |
| 1-138, gnl|canFam2|chr20 (35810344-35810197) | |
| 1-138, gnl|danRer3|chrNA (103256946-103257089) | |
| 1-138, gnl|dasNov1|scaffold_63169 (4071-3921) | |
| 1-138, gnl|echTel1|scaffold_308945 (2909-2771) | |
| 1-138, gnl|fr1|chrUn (266787190-266787055) | |
| 1-138, gnl|galGal2|chr12 (8804131-8804273) | |
| 1-138, gnl|hg17|chr3 (57607082-57607231) | |
| 1-138, gnl|Hg17|chr3 (57607216-57607080) | |
| 1-138, gnl|loxAfr1|scaffold_12322 (25120-25258) | |
| 1-138, gnl|mm7|chr14 (23998982-23998834) | |
| 1-138, gnl|Mm7|chr14 (23998847-23998982) | |
| 1-138, gnl|monDom2|scaffold_5 (2559133-2559263) | |
| 1-138, gnl|oryCun1|scaffold_195781 (20563-20713) | |
| 1-138, gnl|panTro1|chr2 (59329665-59329814) | |
| 1-138, gnl|rheMac2|chr2 (78750161-78750012) | |
| 1-138, gnl|rn3|chr16 (1923468-1923320) | |
| 1-138, gnl|tetNig1|chrUn_random (19096577-19096444) | |
| 1-138, gnl|xenTro1|scaffold_80 (1927845-1927998) | |
| 232-335, gnl|bosTau2|chr22 (33434539-33434642) | |
| 232-335, gnl|canFam2|chr20 (35814014-35813877) | |
| 232-335, gnl|danRer3|chrNA (103252286-103252387) | |
| 232-335, gnl|echTel1|scaffold_275008 (977-828) | |
| 232-335, gnl|fr1|chrUn (266787631-266787515) | |
| 232-335, gnl|galGal2|chr12 (8801121-8801235) | |
| 232-335, gnl|hg17|chr3 (57602405-57602550) | |
| 232-335, gnl|Hg17|chr3 (57602514-57602407) | |
| 232-335, gnl|loxAfr1|scaffold_12322 (19685-19828) | |
| 232-335, gnl|mm7|chr14 (24002845-24002717) | |
| 232-335, gnl|Mm7|chr14 (24002734-24002841) | |
| 232-335, gnl|monDom2|scaffold_5 (2549600-2549752) | |
| 232-335, gnl|oryCun1|scaffold_195781 (17978-18115) | |
| 232-335, gnl|panTro1|chr2 (59324916-59325061) | |
| 232-335, gnl|rheMac2|chr2 (78755300-78755160) | |
| 232-335, gnl|rn3|chr16 (1927639-1927511) | |
| 232-335, gnl|tetNig1|chrUn_random (19096909-19096822) | |
| 232-335, gnl|xenTro1|scaffold_80 (1925508-1925624) | |
| 457-590, gnl|bosTau2|chr22 (33439910-33440043) | |
| 457-590, gnl|Hg17|chr3 (57594122-57593987) | |
| 457-590, gnl|Mm7|chr14 (24010081-24010200) |