Non-Coding RNA Search

Pig2-104N16

Sequence:


               
               GTGAGCTCTGTGACGGAGACAAAGCCTCGGGGGCCGGGAACCCAGGGAGGCCCCACCGGC
ATCTCACGGCCAGGCCTTATGCATGCGAGCTCTGCGCCAAGCCGTTCCAAAGCCCCTCCA
CCCTCAAGATGCACATGAGATGTCACACGGGCGAGAAGCCATACCAGTGCAAGACCTGTG
GGCGCTGCTTCTCGGTGCAAGGCAACCTACAGAAGCACATGCGTATCCACCTGGGCGTGA
AGGAGTTTGTCTGTCAGTATTGCAACAAAGCCTTCACCTTGAACGAGACCCTCAAAATCC
ATGAAAGAATCCACACAGGTGAAAAACGATACCACTGTCAGTTCTGCTTTCAGAGTTTTT
TGTATCTATCCACGAAAAGGAATCATGAGCAGAGGCACGTTCAGGAGCACAATGGGAAGG
GCTATGCCTGCTTCCAGTGCCCCAAAATTTGCAAAACAGCTGCTGCCCTGGGAATGCACC
AGAAGAAACACTTGTTCAAAAGCCCAAGTCAGCGGGAGAAAACAGAAGGTGACGTGGGCC
AGGAAAACTCACATCCCCTGGAGAATCCACATTTCCTTGATTCAGAAGACAGTGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTGAGCTCTGTGACGGAGACAAAGCCTCGGGGGCCGGGAACCCAGGGAGGCCCCACCGGC
ATCTCACGGCCAGGCCTTATGCATGCGAGCTCTGCGCCAAGCCGTTCCAAAGCCCCTCCA
CCCTCAAGATGCACATGAGATGTCACACGGGCGAGAAGCCATACCAGTGCAAGACCTGTG
GGCGCTGCTTCTCGGTGCAAGGCAACCTACAGAAGCACATGCGTATCCACCTGGGCGTGA
AGGAGTTTGTCTGTCAGTATTGCAACAAAGCCTTCACCTTGAACGAGACCCTCAAAATCC
ATGAAAGAATCCACACAGGTGAAAAACGATACCACTGTCAGTTCTGCTTTCAGAGTTTTT
TGTATCTATCCACGAAAAGGAATCATGAGCAGAGGCACGTTCAGGAGCACAATGGGAAGG
GCTATGCCTGCTTCCAGTGCCCCAAAATTTGCAAAACAGCTGCTGCCCTGGGAATGCACC
AGAAGAAACACTTGTTCAAAAGCCCAAGTCAGCGGGAGAAAACAGAAGGTGACGTGGGCC
AGGAAAACTCACATCCCCTGGAGAATCCACATTTCCTTGATTCAGAAGACAGTGA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|10438676|dbj|BAB15309.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|10438676|dbj|BAB15309.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               369-488, - strand, RNAz p=0.507017

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               369-488, - strand, RNAz p=0.507017

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               12-595, gnl|bosTau2|chr1 (79676036-79675453)
               

               
               12-595, gnl|Hg17|chr3 (142646890-142647470)
               

               
               12-595, gnl|Mm7|chr9 (96327705-96327122)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               12-595, gnl|bosTau2|chr1 (79676036-79675453)
               

               
               12-595, gnl|Hg17|chr3 (142646890-142647470)
               

               
               12-595, gnl|Mm7|chr9 (96327705-96327122)

	12-595, gnl\|bosTau2\|chr1 (79676036-79675453)
	12-595, gnl\|Hg17\|chr3 (142646890-142647470)
	12-595, gnl\|Mm7\|chr9 (96327705-96327122)