Pig2-104P08
|
TGCTCTCTAGTTATAGTTCCTAGTTTCTATTTTATTTTAAGGAACTGGCCTTATGAGAAA
AGTATTAGGTGAAATGCTTTGTTCCTCCTTGGTATCTGTTTTATGTAAAGTTCATAAATG
CCCTGAATCAATGTAAGAGTCATTGTGTGGGACTCCTGGTTATATGACTATNGAAAAATT
AAATTGATTAAATGCAGATATAAAAGTGAGTTCTGAGCCTTTAATAAAGGTTTGTTAACT
TTGGTAAAACCAATTTCACATTTTTTTTAATTAAAATCATTTTTTAAACCACAGCTTTTT
TGTTTGGCAGTTTTCCTACAATATATGTTGAGTGGTCCCACAAGCAAGTTTTTAAAAAAG
GAAGTAAAGTGTATCTTTCCTTTAGAGGGGATGGTAGTGAGATATAGGAGGTAACCAGCC
ACTCAAAAGGGAGAATTAAATTACTCATTTTAATGTGTTCTGATCAGGATAGTAACTAAG
GGCTTGCGAAGTCAGTATTTTCTACTTCTTGGGTAAAAACGTCCCTCTCCACCTTTAAAA
AAAAATAAATCAATTTGTGGAATGGGTAAAGTAGTCACATTGTTTTGTA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TGCTCTCTAGTTATAGTTCCTAGTTTCTATTTTATTTTAAGGAACTGGCCTTATGAGAAA
AGTATTAGGTGAAATGCTTTGTTCCTCCTTGGTATCTGTTTTATGTAAAGTTCATAAATG
CCCTGAATCAATGTAAGAGTCATTGTGTGGGACTCCTGGTTATATGACTATNGAAAAATT
AAATTGATTAAATGCAGATATAAAAGTGAGTTCTGAGCCTTTAATAAAGGTTTGTTAACT
TTGGTAAAACCAATTTCACATTTTTTTTAATTAAAATCATTTTTTAAACCACAGCTTTTT
TGTTTGGCAGTTTTCCTACAATATATGTTGAGTGGTCCCACAAGCAAGTTTTTAAAAAAG
GAAGTAAAGTGTATCTTTCCTTTAGAGGGGATGGTAGTGAGATATAGGAGGTAACCAGCC
ACTCAAAAGGGAGAATTAAATTACTCATTTTAATGTGTTCTGATCAGGATAGTAACTAAG
GGCTTGCGAAGTCAGTATTTTCTACTTCTTGGGTAAAAACGTCCCTCTCCACCTTTAAAA
AAAAATAAATCAATTTGTGGAATGGGTAAAGTAGTCACATTGTTTTGTA
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
8-417, gnl|bosTau2|chr19 (35933933-35933509) |
|
8-417, gnl|canFam2|chr32 (6230635-6230971) |
|
8-417, gnl|dasNov1|scaffold_2549 (81742-82064) |
|
8-417, gnl|hg17|chr4 (80157997-80158310) |
|
8-417, gnl|Hg17|chr4 (80158063-80158745) |
|
8-417, gnl|mm7|chr5 (96282647-96282980) |
|
8-417, gnl|Mm7|chr5 (96282717-96283104) |
|
8-417, gnl|monDom2|scaffold_37 (22791901-22791565) |
|
8-417, gnl|panTro1|chr3 (53569052-53568739) |
|
8-417, gnl|rheMac2|chr5 (50720058-50719748) |
|
8-417, gnl|rn3|chr14 (13960008-13959655) |
| |
|
424-589, gnl|bosTau2|chr19 (35933477-35933313) |
|
424-589, gnl|canFam2|chr32 (6231157-6231310) |
|
424-589, gnl|hg17|chr4 (80158773-80158884) |
|
424-589, gnl|mm7|chr5 (96283472-96283592) |
|
424-589, gnl|oryCun1|scaffold_155561 (9495-9381) |
|
424-589, gnl|panTro1|chr3 (53568276-53568165) |
|
424-589, gnl|rheMac2|chr5 (50719298-50719187) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
8-417, gnl|bosTau2|chr19 (35933933-35933509) |
|
8-417, gnl|canFam2|chr32 (6230635-6230971) |
|
8-417, gnl|dasNov1|scaffold_2549 (81742-82064) |
|
8-417, gnl|hg17|chr4 (80157997-80158310) |
|
8-417, gnl|Hg17|chr4 (80158063-80158745) |
|
8-417, gnl|mm7|chr5 (96282647-96282980) |
|
8-417, gnl|Mm7|chr5 (96282717-96283104) |
|
8-417, gnl|monDom2|scaffold_37 (22791901-22791565) |
|
8-417, gnl|panTro1|chr3 (53569052-53568739) |
|
8-417, gnl|rheMac2|chr5 (50720058-50719748) |
|
8-417, gnl|rn3|chr14 (13960008-13959655) |
| |
|
424-589, gnl|bosTau2|chr19 (35933477-35933313) |
|
424-589, gnl|canFam2|chr32 (6231157-6231310) |
|
424-589, gnl|hg17|chr4 (80158773-80158884) |
|
424-589, gnl|mm7|chr5 (96283472-96283592) |
|
424-589, gnl|oryCun1|scaffold_155561 (9495-9381) |
|
424-589, gnl|panTro1|chr3 (53568276-53568165) |
|
424-589, gnl|rheMac2|chr5 (50719298-50719187) |
