Non-Coding RNA Search

Pig2-105B17

Sequence:


               
               GGCCAACCCATTCTTGACATGGAGGGACATGCAGCACCTGGTGGTCCGGGCGTCCAGGCC
AGCACAGCTCCAGGCGGAGGACTGGAGGACCAACGGTGTGGGGCGCCAAGTGAGCCACCA
CTATGGTTACGGGCTATTGGACGCAGGGCTGCTGGTGGACATGGCTCGCTCATGGCGTCC
CCACACAGCCCCAGAAGAAATGTGTTATTCCGATCGTGCACACCCCCACGCCAGCAGGAG
GGGCCCTCACCTCACACATAGCAGCCCCCAGCCCCATCCTGCCACTGATGCATGTGAGGA
AGAATGTGTCGGCCTGCGCTGGCCACGCCAACTACATCCGTTCATTGGAGCACGTGCAGG
TGCAGCTGTCCCTGTCCTACAGCCGCCGAGGGGACCTGGAGATCTCGCTCACCAGCCCCA
TGGGCACCCGCTCCACACTTGTGGCCATCAGACCCTTTGATATCAGTGGTCAAGGCTACG
ACAACTGGATCTTCATGTCCACCCATTTCTGGGATGAGGACCCGCGAGGCTTGTGGACAC
TGGGCCTGGAGAACAAGGGCTACTACTTCAACACAGGGACACTGTACC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGCCAACCCATTCTTGACATGGAGGGACATGCAGCACCTGGTGGTCCGGGCGTCCAGGCC
AGCACAGCTCCAGGCGGAGGACTGGAGGACCAACGGTGTGGGGCGCCAAGTGAGCCACCA
CTATGGTTACGGGCTATTGGACGCAGGGCTGCTGGTGGACATGGCTCGCTCATGGCGTCC
CCACACAGCCCCAGAAGAAATGTGTTATTCCGATCGTGCACACCCCCACGCCAGCAGGAG
GGGCCCTCACCTCACACATAGCAGCCCCCAGCCCCATCCTGCCACTGATGCATGTGAGGA
AGAATGTGTCGGCCTGCGCTGGCCACGCCAACTACATCCGTTCATTGGAGCACGTGCAGG
TGCAGCTGTCCCTGTCCTACAGCCGCCGAGGGGACCTGGAGATCTCGCTCACCAGCCCCA
TGGGCACCCGCTCCACACTTGTGGCCATCAGACCCTTTGATATCAGTGGTCAAGGCTACG
ACAACTGGATCTTCATGTCCACCCATTTCTGGGATGAGGACCCGCGAGGCTTGTGGACAC
TGGGCCTGGAGAACAAGGGCTACTACTTCAACACAGGGACACTGTACC

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|61845651|ref|XP_585571.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61845651|ref|XP_585571.1|

Aligned organism(s): 9 entry(ies)

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Aligned organism(s): 9 entry(ies)

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               109-235, gnl|bosTau2|chr7 (29001680-29001805)
               

               
               109-235, gnl|Hg17|chr19 (1434768-1434643)
               

               
               109-235, gnl|Mm7|chr10 (80105994-80105869)
               


               
               264-451, gnl|bosTau2|chr7 (29002112-29002299)
               

               
               264-451, gnl|Hg17|chr19 (1434480-1434283)
               

               
               264-451, gnl|Mm7|chr10 (80105576-80105381)
               


               
               289-445, gnl|bosTau2|chr21 (12180359-12180203)
               

               
               289-445, gnl|Hg17|chr15 (89224345-89224501)
               

               
               289-445, gnl|Mm7|chr7 (76263791-76263635)

Aligned organism(s): 9 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               109-235, gnl|bosTau2|chr7 (29001680-29001805)
               

               
               109-235, gnl|Hg17|chr19 (1434768-1434643)
               

               
               109-235, gnl|Mm7|chr10 (80105994-80105869)
               


               
               264-451, gnl|bosTau2|chr7 (29002112-29002299)
               

               
               264-451, gnl|Hg17|chr19 (1434480-1434283)
               

               
               264-451, gnl|Mm7|chr10 (80105576-80105381)
               


               
               289-445, gnl|bosTau2|chr21 (12180359-12180203)
               

               
               289-445, gnl|Hg17|chr15 (89224345-89224501)
               

               
               289-445, gnl|Mm7|chr7 (76263791-76263635)

	109-235, gnl\|bosTau2\|chr7 (29001680-29001805)
	109-235, gnl\|Hg17\|chr19 (1434768-1434643)
	109-235, gnl\|Mm7\|chr10 (80105994-80105869)

	264-451, gnl\|bosTau2\|chr7 (29002112-29002299)
	264-451, gnl\|Hg17\|chr19 (1434480-1434283)
	264-451, gnl\|Mm7\|chr10 (80105576-80105381)

	289-445, gnl\|bosTau2\|chr21 (12180359-12180203)
	289-445, gnl\|Hg17\|chr15 (89224345-89224501)
	289-445, gnl\|Mm7\|chr7 (76263791-76263635)