Non-Coding RNA Search

Pig2-105B24

Sequence:


               
               GTGAATTATGGAATTCAGAACCACAAAGCCTCTGACATTGCTTCTGTTAAAACCCCTGAT
GGATTTACCCACTCTCAGGTTCAAGGCGACCTGCATCTAGCCCTGTCATTACATTATTTA
AGAACATAGTCTGTGGCGAATGATGTCCAGCTTGTTAAGATTCCAGGCAGTAGAGTCTAT
TCATACAGCCCAGGCAGCAGAGAGAAGTGGAGCTCATACTGCAGGTGGCAAAGAGAGGCC
ATTTCAGTTAATACAAAATAAATGACTTTTCTCCTAGAGGGTGGGTGGTAGGTGAGAAGG
AGAGATGCCTCTTTTTCTGTCAGTACTGAGAAAATTATCTGTTTTGAAATAGAAGTCTCT
TAGGTTACACTTGAGGGAAGATGCAACCAGTTAGCCCTTTCTGAGGGTTCTCTTCTTACT
GAGCTCAGGAAGTAAACAGAAAGGATTCCGAAGAGGCCTTTGGCTAAAGAGCCAAATCAA
TGTCCCCATATCCACATACTGCCACTCATATACTACATTCAAAAGAGCTTTCCGATGCTC
ACCCTAGGAGACTCTTGGTTTTGTATTAAATTGTATGTCTGATA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTGAATTATGGAATTCAGAACCACAAAGCCTCTGACATTGCTTCTGTTAAAACCCCTGAT
GGATTTACCCACTCTCAGGTTCAAGGCGACCTGCATCTAGCCCTGTCATTACATTATTTA
AGAACATAGTCTGTGGCGAATGATGTCCAGCTTGTTAAGATTCCAGGCAGTAGAGTCTAT
TCATACAGCCCAGGCAGCAGAGAGAAGTGGAGCTCATACTGCAGGTGGCAAAGAGAGGCC
ATTTCAGTTAATACAAAATAAATGACTTTTCTCCTAGAGGGTGGGTGGTAGGTGAGAAGG
AGAGATGCCTCTTTTTCTGTCAGTACTGAGAAAATTATCTGTTTTGAAATAGAAGTCTCT
TAGGTTACACTTGAGGGAAGATGCAACCAGTTAGCCCTTTCTGAGGGTTCTCTTCTTACT
GAGCTCAGGAAGTAAACAGAAAGGATTCCGAAGAGGCCTTTGGCTAAAGAGCCAAATCAA
TGTCCCCATATCCACATACTGCCACTCATATACTACATTCAAAAGAGCTTTCCGATGCTC
ACCCTAGGAGACTCTTGGTTTTGTATTAAATTGTATGTCTGATA

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               418-524, - strand, RNAz p=0.680514

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               418-524, - strand, RNAz p=0.680514

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-524, gnl|bosTau2|chr5 (32377360-32377897)
               

               
               1-524, gnl|Hg17|chr12 (61330096-61330965)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-524, gnl|bosTau2|chr5 (32377360-32377897)
               

               
               1-524, gnl|Hg17|chr12 (61330096-61330965)

	1-524, gnl\|bosTau2\|chr5 (32377360-32377897)
	1-524, gnl\|Hg17\|chr12 (61330096-61330965)