Non-Coding RNA Search

Pig2-106C23

Sequence:


               
               GCAGAaaacgaaactgactggtatccatgtggacgcgggttcaacccctcacctcgctca
gtgggttaaggatccgttgttgccgtgagctatagtatgagttgaagacggggctcagat
ctggcattgctgtggctgtggcaggaagctacagctctgattcaacccctagcctgggaa
cctccatatgctgcaggtgtggccctgaaatgacCAAAAAAATTTTGCTGGTCTCTGTCT
CCACTACTGAACTCTGCCATTACAGAAACAAGCTGGCCATGGAGTGCCAGCCACGCAAGT
AGAACCCTCTAAGCCCTTGGATATTTGATTGGTTCCTAGAGGGGCAAGTAAATCCCCAGA
CAGGTCCCAACAAGCCAGCATTTTCTTGAACAGTTCATTGCACTGAACTGGGCAGGATGT
GAGTCTGAAGCTATGGGACTCCTTCCAAGGACTCTGAGAATGAAGCCCACCCATGGAAAG
GCAGGATTAGCAATGCAGAGAACCTAAGGGCATCATTTTTTTAAGCCCCTGGATCACACT
TCACCTGCAGCAAGCCCTACTCCTTGATGTTTCAGTTCACACGGGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCAGAaaacgaaactgactggtatccatgtggacgcgggttcaacccctcacctcgctca
gtgggttaaggatccgttgttgccgtgagctatagtatgagttgaagacggggctcagat
ctggcattgctgtggctgtggcaggaagctacagctctgattcaacccctagcctgggaa
cctccatatgctgcaggtgtggccctgaaatgacCAAAAAAATTTTGCTGGTCTCTGTCT
CCACTACTGAACTCTGCCATTACAGAAACAAGCTGGCCATGGAGTGCCAGCCACGCAAGT
AGAACCCTCTAAGCCCTTGGATATTTGATTGGTTCCTAGAGGGGCAAGTAAATCCCCAGA
CAGGTCCCAACAAGCCAGCATTTTCTTGAACAGTTCATTGCACTGAACTGGGCAGGATGT
GAGTCTGAAGCTATGGGACTCCTTCCAAGGACTCTGAGAATGAAGCCCACCCATGGAAAG
GCAGGATTAGCAATGCAGAGAACCTAAGGGCATCATTTTTTTAAGCCCCTGGATCACACT
TCACCTGCAGCAAGCCCTACTCCTTGATGTTTCAGTTCACACGGGT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               331-448, + strand, RNAz p=0.875417

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               331-448, + strand, RNAz p=0.875417

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

Help | Less info


               
               218-569, gnl|bosTau2|chr23 (13928443-13928092)
               

               
               218-569, gnl|Hg17|chr6 (41611122-41611559)

Aligned organism(s): 2 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               218-569, gnl|bosTau2|chr23 (13928443-13928092)
               

               
               218-569, gnl|Hg17|chr6 (41611122-41611559)

	218-569, gnl\|bosTau2\|chr23 (13928443-13928092)
	218-569, gnl\|Hg17\|chr6 (41611122-41611559)