Pig2-107H04
|
GATTGTCCGCGGTCGCTGGTCCTCTTGACTCTGAGGCCGGAGGCCAGAGACAAGGTCAGG
CCGGATGCAGCACCCTCTCCCTCCGCACGCCTCCAACGGGCAGCCCGGAGCAGAGGCAAG
GCCCCCGGGGCAGAAACAGAAGAGCGCCTAGTTCGCCCGCTGCCAGCAGCTAACCCTCGT
CTGGCGTAGTTTAGGCCCTGCCCTGGGAGAGCAGGACATCCCCACAACCATTGCTGCCTT
GGACTAAGAAGCTTCCGCCTGTGCCACACCAGCCGAGATTGCCTGAGGAATTGAGTCAGC
GTCTTCCTGGATGGTGCTGAAAGGCTGGATTCCTAGAAGACAGGAATTTATGGTGTGAGA
GCTCCAGCCCCCGCAAACCCACAGCCAAGGTCAACAGCACGAGGCGGGCAGCGCTGCCAA
GCAAGGAGGGGAGCCCAGAAAACCAAAGTACATGCATTTAAAAAATTCTCTTTTCTCCCT
CACGTTCCCAAAAGGGGGGCTC
|
Blue-coloured subsequences are predicted RNA structures by RNAz
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GATTGTCCGCGGTCGCTGGTCCTCTTGACTCTGAGGCCGGAGGCCAGAGACAAGGTCAGG
CCGGATGCAGCACCCTCTCCCTCCGCACGCCTCCAACGGGCAGCCCGGAGCAGAGGCAAG
GCCCCCGGGGCAGAAACAGAAGAGCGCCTAGTTCGCCCGCTGCCAGCAGCTAACCCTCGT
CTGGCGTAGTTTAGGCCCTGCCCTGGGAGAGCAGGACATCCCCACAACCATTGCTGCCTT
GGACTAAGAAGCTTCCGCCTGTGCCACACCAGCCGAGATTGCCTGAGGAATTGAGTCAGC
GTCTTCCTGGATGGTGCTGAAAGGCTGGATTCCTAGAAGACAGGAATTTATGGTGTGAGA
GCTCCAGCCCCCGCAAACCCACAGCCAAGGTCAACAGCACGAGGCGGGCAGCGCTGCCAA
GCAAGGAGGGGAGCCCAGAAAACCAAAGTACATGCATTTAAAAAATTCTCTTTTCTCCCT
CACGTTCCCAAAAGGGGGGCTC
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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322-501, gnl|bosTau2|chr25 (30199176-30199355) |
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322-501, gnl|canFam2|chr6 (9359533-9359111) |
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322-501, gnl|galGal2|chr19 (567224-567624) |
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322-501, gnl|hg17|chr7 (72858739-72859170) |
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322-501, gnl|Hg17|chr7 (72858881-72859096) |
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322-501, gnl|loxAfr1|scaffold_33340 (21691-21307) |
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322-501, gnl|mm7|chr5 (133743884-133744298) |
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322-501, gnl|Mm7|chr5 (133744027-133744227) |
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322-501, gnl|monDom2|scaffold_77 (6580275-6580649) |
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322-501, gnl|panTro1|chr6 (74598348-74598779) |
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322-501, gnl|rheMac2|chr3 (51538907-51539348) |
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322-501, gnl|rn3|chr12 (22860354-22859940) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
322-501, gnl|bosTau2|chr25 (30199176-30199355) |
|
322-501, gnl|canFam2|chr6 (9359533-9359111) |
|
322-501, gnl|galGal2|chr19 (567224-567624) |
|
322-501, gnl|hg17|chr7 (72858739-72859170) |
|
322-501, gnl|Hg17|chr7 (72858881-72859096) |
|
322-501, gnl|loxAfr1|scaffold_33340 (21691-21307) |
|
322-501, gnl|mm7|chr5 (133743884-133744298) |
|
322-501, gnl|Mm7|chr5 (133744027-133744227) |
|
322-501, gnl|monDom2|scaffold_77 (6580275-6580649) |
|
322-501, gnl|panTro1|chr6 (74598348-74598779) |
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322-501, gnl|rheMac2|chr3 (51538907-51539348) |
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322-501, gnl|rn3|chr12 (22860354-22859940) |
