Non-Coding RNA Search

Pig2-109B14

Sequence:


               
               CCCCGACAGAACGTGTGCTGGAGAAGTCGCTGCATCGCTCCGTGCTCAAGCCTCTCCGGC
CCATCCTGGTGGCTCGGTTGCGGCGCCGGCTTTCCACCAGCGGTTCCCTGGGCCGCCTGG
CTGAAGGCCTCCGCCTGGCCCGGACCCAGGGCCCCAGAGCCTTTGGGTCTCGCTTAAGCC
TGCCCTCCCCGGTAGAGGTGGAGCAGGTGCGCCAGAAGCTGCTGCAGCTGCTTCGAGCCT
ACTCACCCAGCGCCCAGGTCAAGCGGCTCCTGCAGGCCTGCAAGCTGCTCTACACAGCCC
TGAGGACCCAGGCGGGGGAGGGAGCTGGGGCTGATGAGTTCCTCCCACTGCTAAGCCTTG
TCCTGGCCCAATGTGACCTTCCTGAGCTGCTGCTGGAGGCTGAGTACA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCCCGACAGAACGTGTGCTGGAGAAGTCGCTGCATCGCTCCGTGCTCAAGCCTCTCCGGC
CCATCCTGGTGGCTCGGTTGCGGCGCCGGCTTTCCACCAGCGGTTCCCTGGGCCGCCTGG
CTGAAGGCCTCCGCCTGGCCCGGACCCAGGGCCCCAGAGCCTTTGGGTCTCGCTTAAGCC
TGCCCTCCCCGGTAGAGGTGGAGCAGGTGCGCCAGAAGCTGCTGCAGCTGCTTCGAGCCT
ACTCACCCAGCGCCCAGGTCAAGCGGCTCCTGCAGGCCTGCAAGCTGCTCTACACAGCCC
TGAGGACCCAGGCGGGGGAGGGAGCTGGGGCTGATGAGTTCCTCCCACTGCTAAGCCTTG
TCCTGGCCCAATGTGACCTTCCTGAGCTGCTGCTGGAGGCTGAGTACA

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               160-279, - strand, RNAz p=0.955997

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               160-279, - strand, RNAz p=0.955997

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-316, gnl|bosTau2|chr29 (37183582-37183897)
               

               
               1-316, gnl|Hg17|chr11 (65858280-65857965)
               

               
               1-316, gnl|Mm7|chr19 (4947767-4948082)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-316, gnl|bosTau2|chr29 (37183582-37183897)
               

               
               1-316, gnl|Hg17|chr11 (65858280-65857965)
               

               
               1-316, gnl|Mm7|chr19 (4947767-4948082)

	1-316, gnl\|bosTau2\|chr29 (37183582-37183897)
	1-316, gnl\|Hg17\|chr11 (65858280-65857965)
	1-316, gnl\|Mm7\|chr19 (4947767-4948082)