Non-Coding RNA Search

Pig2-109O04

Sequence:


               
               GGCGAGGGGGAGCTGGAGGGTTAAAATAGCAGCGGCCCGGTTTCGGTTAGCAAATGTGGA
GGCGGGGAGCTGGGGGCGGGGCAGGCGGCGGCCCGTGTTTGCCCGCAGCTCAGGGCTGTG
TTTCCCCTGGGTCCCAGGAGTGAGTCACAGTGGAGCCGCCGAGAAGAGGTGCTGGCGCAG
CGCCCCCACCCCCACCGGGCGAGGGGCTGGGCGCTGGCTTCATCTCCAGGGTTCTAGAGG
GGGTGCATCTCCCTGCCAGGCCTTCAGAACCCTCTCACGGGTCGGACCAGGGAGACGGTG
GGATGGCGGGGAAGAAGGGCACGGTTCTGAGCCCAAAGACCTAGGTCTGAATCCCAGCCC
AGTGGCTGGGGGACCTCCTGCCGGGGTGCCAAGGGCTCTGAGACTCAGTTTCCTAGTCTT
TCGAGTGGGGATTTTCTCATACGCATGTGACACATTTGCTGGATTTGAATGCACCCTCCA
GATGTGAATAATCGCCTTTGGCTCCTCCGTACCCATTGCAAAGCTTGGCAGAAGGGCCTT
CCTGTGAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGCGAGGGGGAGCTGGAGGGTTAAAATAGCAGCGGCCCGGTTTCGGTTAGCAAATGTGGA
GGCGGGGAGCTGGGGGCGGGGCAGGCGGCGGCCCGTGTTTGCCCGCAGCTCAGGGCTGTG
TTTCCCCTGGGTCCCAGGAGTGAGTCACAGTGGAGCCGCCGAGAAGAGGTGCTGGCGCAG
CGCCCCCACCCCCACCGGGCGAGGGGCTGGGCGCTGGCTTCATCTCCAGGGTTCTAGAGG
GGGTGCATCTCCCTGCCAGGCCTTCAGAACCCTCTCACGGGTCGGACCAGGGAGACGGTG
GGATGGCGGGGAAGAAGGGCACGGTTCTGAGCCCAAAGACCTAGGTCTGAATCCCAGCCC
AGTGGCTGGGGGACCTCCTGCCGGGGTGCCAAGGGCTCTGAGACTCAGTTTCCTAGTCTT
TCGAGTGGGGATTTTCTCATACGCATGTGACACATTTGCTGGATTTGAATGCACCCTCCA
GATGTGAATAATCGCCTTTGGCTCCTCCGTACCCATTGCAAAGCTTGGCAGAAGGGCCTT
CCTGTGAG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               181-275, - strand, RNAz p=0.998148

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               181-275, - strand, RNAz p=0.998148

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-275, gnl|bosTau2|chr5 (25338325-25338049)
               

               
               1-275, gnl|Hg17|chr12 (46493225-46492933)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-275, gnl|bosTau2|chr5 (25338325-25338049)
               

               
               1-275, gnl|Hg17|chr12 (46493225-46492933)

	1-275, gnl\|bosTau2\|chr5 (25338325-25338049)
	1-275, gnl\|Hg17\|chr12 (46493225-46492933)