Non-Coding RNA Search

Pig2-10P09

Sequence:


               
               GATTTCGTCCCCCTTTCCCACAACGATCTTGGGGATGAAACCTTCGGGCTGAAGCCCCCT
CACTTTTTACCCAGACCCAACTTCAGAGACTTTAATTCTTTGGGGGTGTTGTGTGTGAGT
TTAAGTGGTGTGTTTGTGTGCGTGCATCGAGGTCAGGTGTAAATGTGTTATTTGTGAGCA
CTTCCGCGGTAGCGGCTCTCTAACTCGCGTGGGTCTCTAAGCGCGCCTGAAGGCTGGACA
TGCGGTTTGTGCCCCTCTGGGAGGGGAGGGGAGTGTGGCTGGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GATTTCGTCCCCCTTTCCCACAACGATCTTGGGGATGAAACCTTCGGGCTGAAGCCCCCT
CACTTTTTACCCAGACCCAACTTCAGAGACTTTAATTCTTTGGGGGTGTTGTGTGTGAGT
TTAAGTGGTGTGTTTGTGTGCGTGCATCGAGGTCAGGTGTAAATGTGTTATTTGTGAGCA
CTTCCGCGGTAGCGGCTCTCTAACTCGCGTGGGTCTCTAAGCGCGCCTGAAGGCTGGACA
TGCGGTTTGTGCCCCTCTGGGAGGGGAGGGGAGTGTGGCTGGA

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               17-132, - strand, RNAz p=0.803508

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               17-132, - strand, RNAz p=0.803508

Aligned organism(s): 10 entry(ies)

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Aligned organism(s): 10 entry(ies)

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               3-277, gnl|bosTau2|chr19 (31542238-31542512)
               

               
               3-277, gnl|canFam2|chr9 (26855076-26854470)
               

               
               3-277, gnl|hg17|chr17 (34113837-34114425)
               

               
               3-277, gnl|Hg17|chr17 (34114072-34114336)
               

               
               3-277, gnl|mm7|chr11 (97770983-97771528)
               

               
               3-277, gnl|Mm7|chr11 (97771225-97771465)
               

               
               3-277, gnl|monDom2|scaffold_18 (47612412-47613115)
               

               
               3-277, gnl|panTro1|chr19 (37329746-37330330)
               

               
               3-277, gnl|rheMac2|chr16 (48731349-48731943)
               

               
               3-277, gnl|rn3|chr10 (86425688-86426241)

Aligned organism(s): 10 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-277, gnl|bosTau2|chr19 (31542238-31542512)
               

               
               3-277, gnl|canFam2|chr9 (26855076-26854470)
               

               
               3-277, gnl|hg17|chr17 (34113837-34114425)
               

               
               3-277, gnl|Hg17|chr17 (34114072-34114336)
               

               
               3-277, gnl|mm7|chr11 (97770983-97771528)
               

               
               3-277, gnl|Mm7|chr11 (97771225-97771465)
               

               
               3-277, gnl|monDom2|scaffold_18 (47612412-47613115)
               

               
               3-277, gnl|panTro1|chr19 (37329746-37330330)
               

               
               3-277, gnl|rheMac2|chr16 (48731349-48731943)
               

               
               3-277, gnl|rn3|chr10 (86425688-86426241)

	3-277, gnl\|bosTau2\|chr19 (31542238-31542512)
	3-277, gnl\|canFam2\|chr9 (26855076-26854470)
	3-277, gnl\|hg17\|chr17 (34113837-34114425)
	3-277, gnl\|Hg17\|chr17 (34114072-34114336)
	3-277, gnl\|mm7\|chr11 (97770983-97771528)
	3-277, gnl\|Mm7\|chr11 (97771225-97771465)
	3-277, gnl\|monDom2\|scaffold_18 (47612412-47613115)
	3-277, gnl\|panTro1\|chr19 (37329746-37330330)
	3-277, gnl\|rheMac2\|chr16 (48731349-48731943)
	3-277, gnl\|rn3\|chr10 (86425688-86426241)