Pig2-110G02
|
GGGGCTGGAGGTCCCGCGCCCGAGGCCGAGGGTTTAGTCAATTTTGCCCGCGTAGTGAAG
CCNCCAGTGGGGTTTGGGGAGCCGCCGGGCTGGTGCGGGACGGTGGCGCCGTCGGTGCGG
GAAGCTCCCTGTGCCTTCCCACGTGCGCTGCCCCTTGCATCTCTGCCCTCCGGCTGCTCC
CCAGGTCCCCCCTTTTATAATTAACCTATAATCTAGTCTGGGAGGGGGTTTGAAGCCGCA
GAAGCCAGGTCCCTGCAGTGGTAGGGTCCCTCCACTGCTTCTTGCCAGGCCTCCCACTCC
GGGGGTCCCTTCTGAGAAAGAGGGTGGCTGGGGCCTGAAATCCCAGCCCCCTCCCCCAGT
GCAGGACGGCAATTTCCCAGTACCTTCTCCAGCCATCCAGTGGGGACCGAAGCCTCCGAA
AGCAGGGTACCAGCCTGCGCTCGGCTACAGACC
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GGGGCTGGAGGTCCCGCGCCCGAGGCCGAGGGTTTAGTCAATTTTGCCCGCGTAGTGAAG
CCNCCAGTGGGGTTTGGGGAGCCGCCGGGCTGGTGCGGGACGGTGGCGCCGTCGGTGCGG
GAAGCTCCCTGTGCCTTCCCACGTGCGCTGCCCCTTGCATCTCTGCCCTCCGGCTGCTCC
CCAGGTCCCCCCTTTTATAATTAACCTATAATCTAGTCTGGGAGGGGGTTTGAAGCCGCA
GAAGCCAGGTCCCTGCAGTGGTAGGGTCCCTCCACTGCTTCTTGCCAGGCCTCCCACTCC
GGGGGTCCCTTCTGAGAAAGAGGGTGGCTGGGGCCTGAAATCCCAGCCCCCTCCCCCAGT
GCAGGACGGCAATTTCCCAGTACCTTCTCCAGCCATCCAGTGGGGACCGAAGCCTCCGAA
AGCAGGGTACCAGCCTGCGCTCGGCTACAGACC
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
279-380, gnl|bosTau2|chr25 (3482958-3483059) |
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279-380, gnl|canFam2|chr6 (41227770-41227472) |
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279-380, gnl|dasNov1|scaffold_188009 (3492-3796) |
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279-380, gnl|hg17|chr16 (2988708-2989010) |
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279-380, gnl|Hg17|chr16 (2988868-2988981) |
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279-380, gnl|loxAfr1|scaffold_38922 (18340-18042) |
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279-380, gnl|mm7|chr17 (21888234-21887947) |
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279-380, gnl|Mm7|chr17 (21888071-21887973) |
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279-380, gnl|oryCun1|scaffold_115061 (3834-3666) |
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279-380, gnl|panTro1|chr18 (2873110-2873412) |
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279-380, gnl|rheMac2|chr20 (3141890-3142192) |
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279-380, gnl|rn3|chr10 (12964614-12964263) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
279-380, gnl|bosTau2|chr25 (3482958-3483059) |
|
279-380, gnl|canFam2|chr6 (41227770-41227472) |
|
279-380, gnl|dasNov1|scaffold_188009 (3492-3796) |
|
279-380, gnl|hg17|chr16 (2988708-2989010) |
|
279-380, gnl|Hg17|chr16 (2988868-2988981) |
|
279-380, gnl|loxAfr1|scaffold_38922 (18340-18042) |
|
279-380, gnl|mm7|chr17 (21888234-21887947) |
|
279-380, gnl|Mm7|chr17 (21888071-21887973) |
|
279-380, gnl|oryCun1|scaffold_115061 (3834-3666) |
|
279-380, gnl|panTro1|chr18 (2873110-2873412) |
|
279-380, gnl|rheMac2|chr20 (3141890-3142192) |
|
279-380, gnl|rn3|chr10 (12964614-12964263) |
