Non-Coding RNA Search

Pig2-110H11

Sequence:


               
               GAGGCGTTCCTGCGATGAGCCCTCCTCCGAACCGGAACACATGGGCAGAGATGGAGCTCA
GGGTGCAGGTTTGGATCCAGTAGGGTCTTACCTCGGCGCACCCGCGATGACAGCAGTAGT
GACAGTCGGCAGAATTCCCACGGGGCCCACTCTGTGCCTCTCAGGGCACGTTCACGTCCA
GCTCAGCGGCGTTTCCCCGATCCACTCGGATGACGGAGAGAAACAATCTCACATTGCCAA
CGTGACGGAGAGGTACTTACGGCTAAATGGTGTCCTTCAGGGGAGCCTGAAAGCCTGCTT
CCCCAGCCTCTCCACTCGAGTTAAAAGCTACTTTGTTAAAGGCAGAAATTAGGAGCGTTA
CAAGTGGGCTTTGCAGAAGCGGACGGGCGGCGGGCTTGCTCTCCTGTTGTTTTGCTCTCC
TCTTCACAGCGAGCCTGGCACGGGGCGGGGGTGGGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAGGCGTTCCTGCGATGAGCCCTCCTCCGAACCGGAACACATGGGCAGAGATGGAGCTCA
GGGTGCAGGTTTGGATCCAGTAGGGTCTTACCTCGGCGCACCCGCGATGACAGCAGTAGT
GACAGTCGGCAGAATTCCCACGGGGCCCACTCTGTGCCTCTCAGGGCACGTTCACGTCCA
GCTCAGCGGCGTTTCCCCGATCCACTCGGATGACGGAGAGAAACAATCTCACATTGCCAA
CGTGACGGAGAGGTACTTACGGCTAAATGGTGTCCTTCAGGGGAGCCTGAAAGCCTGCTT
CCCCAGCCTCTCCACTCGAGTTAAAAGCTACTTTGTTAAAGGCAGAAATTAGGAGCGTTA
CAAGTGGGCTTTGCAGAAGCGGACGGGCGGCGGGCTTGCTCTCCTGTTGTTTTGCTCTCC
TCTTCACAGCGAGCCTGGCACGGGGCGGGGGTGGGG

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               280-397, - strand, RNAz p=0.807549

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               280-397, - strand, RNAz p=0.807549

Predicted microRNA(s): 1 entry(ies)

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Predicted microRNA(s): 1 entry(ies)

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               321-428, - strand, RNAmicro p=0.993844

Predicted microRNA(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro


               
               321-428, - strand, RNAmicro p=0.993844

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               23-417, gnl|bosTau2|chr25 (37910244-37909847)
               

               
               23-417, gnl|Hg17|chr7 (3791427-3791837)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               23-417, gnl|bosTau2|chr25 (37910244-37909847)
               

               
               23-417, gnl|Hg17|chr7 (3791427-3791837)

	23-417, gnl\|bosTau2\|chr25 (37910244-37909847)
	23-417, gnl\|Hg17\|chr7 (3791427-3791837)