Non-Coding RNA Search

Pig2-111M11

Sequence:


               
               CCGGGGCCGCTCCCTTCGCCCCCCTGCAGCCCCCCTCAGCCCCGGCCCCTGGCGATTACC
CCAGCCAGGGTTCCAGCTTCCTGGGACCCGGGACCTTCCCCGACTCCTTCCCGCCCACCA
CACCCAGCACCCCAACCCTCACTGAGTTCACCCCGGGGCCACCCCCTGTCTCCTATCAAT
CCGACATTCCCAGCAGCCTCCTGACGTACAGAAAAGTCCGCCCCCTGCCTCCCAGGCCAG
ATGGCACCAGCGGGTCACCTGGACCCAGCCCATAACCCCGGGCCACCGGGGCTGCACGCC
CCCAACCTCGGAGGCCCCCCAGGGCCTCAGCTGCAGCATCCGAACCCTCCGCCAGCATCC
CGGCAGCCCTTGGGTCCAGTGAGCTCGGGGCCCATTGGCGAGCTGGCCTTCAGTGCTGCC
ACAGGCATGATGGGGCCCCCCATGTCTGGGGCGGGGGAGGCCCCGGAACCGGCCCTGGAC
GTGGCGTATGTGCGAGTCAGAATCAGTGCACGAGAGACAGGTGACCAGGCCTCAGCCATG
ATAAATGAACACGAAATTCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCGGGGCCGCTCCCTTCGCCCCCCTGCAGCCCCCCTCAGCCCCGGCCCCTGGCGATTACC
CCAGCCAGGGTTCCAGCTTCCTGGGACCCGGGACCTTCCCCGACTCCTTCCCGCCCACCA
CACCCAGCACCCCAACCCTCACTGAGTTCACCCCGGGGCCACCCCCTGTCTCCTATCAAT
CCGACATTCCCAGCAGCCTCCTGACGTACAGAAAAGTCCGCCCCCTGCCTCCCAGGCCAG
ATGGCACCAGCGGGTCACCTGGACCCAGCCCATAACCCCGGGCCACCGGGGCTGCACGCC
CCCAACCTCGGAGGCCCCCCAGGGCCTCAGCTGCAGCATCCGAACCCTCCGCCAGCATCC
CGGCAGCCCTTGGGTCCAGTGAGCTCGGGGCCCATTGGCGAGCTGGCCTTCAGTGCTGCC
ACAGGCATGATGGGGCCCCCCATGTCTGGGGCGGGGGAGGCCCCGGAACCGGCCCTGGAC
GTGGCGTATGTGCGAGTCAGAATCAGTGCACGAGAGACAGGTGACCAGGCCTCAGCCATG
ATAAATGAACACGAAATTCA

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               14-170, - strand, RNAz p=0.993676

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               14-170, - strand, RNAz p=0.993676

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               14-240, gnl|bosTau2|chr4 (43055733-43055955)
               

               
               14-240, gnl|Hg17|chr7 (44578946-44579172)
               

               
               14-240, gnl|Mm7|chr11 (6355745-6355958)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               14-240, gnl|bosTau2|chr4 (43055733-43055955)
               

               
               14-240, gnl|Hg17|chr7 (44578946-44579172)
               

               
               14-240, gnl|Mm7|chr11 (6355745-6355958)

	14-240, gnl\|bosTau2\|chr4 (43055733-43055955)
	14-240, gnl\|Hg17\|chr7 (44578946-44579172)
	14-240, gnl\|Mm7\|chr11 (6355745-6355958)