Non-Coding RNA Search

Pig2-112B14

Sequence:


               
               GGAAGGAAGGGAGGGAGAGAGCCTATCTGAGGGATAGTCCCTGTCCCTGTCCCTGTTGTC
ACCCCCTGCCCACAGTAGCTCTTCCTTCTGGCATCACCCCGTCCCTAATGCTGGGGAGGC
AGGACACAGCCCGAGTCCAGCAGTGCACAGAAGCCCTGCTGGGTGAGGCAGACGTTGGGG
AGACTAACAGGACAGGAGGCTTTAGCCTCCCAAAGCTGAGACTCCGTGTTGGAGGGGACG
CTCTGCAGATTCCCTCCTACCTCAGTCCATCCCCGCAGTGTCTGCTCTGTCCAGGGTCAC
CCAGGCTGCCCCTCCTTCCGGCTGCAGGGAGAGAGGCAGCTCCAATCATTCATCTTAATG
TCTCTATTAAGCAGGGTTATGACCAGGATGAGACAAGAAACAAGGTCTTTTAGTGTAAAA
ACACGGCTTCCAGGGCTTGGCCCCAGGGGACTCCTCCCGGGCACTGCCGCTGCTCCCAGC
TACTGCTGCTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGAAGGAAGGGAGGGAGAGAGCCTATCTGAGGGATAGTCCCTGTCCCTGTCCCTGTTGTC
ACCCCCTGCCCACAGTAGCTCTTCCTTCTGGCATCACCCCGTCCCTAATGCTGGGGAGGC
AGGACACAGCCCGAGTCCAGCAGTGCACAGAAGCCCTGCTGGGTGAGGCAGACGTTGGGG
AGACTAACAGGACAGGAGGCTTTAGCCTCCCAAAGCTGAGACTCCGTGTTGGAGGGGACG
CTCTGCAGATTCCCTCCTACCTCAGTCCATCCCCGCAGTGTCTGCTCTGTCCAGGGTCAC
CCAGGCTGCCCCTCCTTCCGGCTGCAGGGAGAGAGGCAGCTCCAATCATTCATCTTAATG
TCTCTATTAAGCAGGGTTATGACCAGGATGAGACAAGAAACAAGGTCTTTTAGTGTAAAA
ACACGGCTTCCAGGGCTTGGCCCCAGGGGACTCCTCCCGGGCACTGCCGCTGCTCCCAGC
TACTGCTGCTG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               161-395, - strand, RNAz p=0.964842

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               161-395, - strand, RNAz p=0.964842

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               56-491, gnl|bosTau2|chr3 (70747865-70748312)
               

               
               56-491, gnl|Hg17|chr1 (44499888-44500326)
               

               
               56-491, gnl|Mm7|chr4 (116916628-116916203)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               56-491, gnl|bosTau2|chr3 (70747865-70748312)
               

               
               56-491, gnl|Hg17|chr1 (44499888-44500326)
               

               
               56-491, gnl|Mm7|chr4 (116916628-116916203)

	56-491, gnl\|bosTau2\|chr3 (70747865-70748312)
	56-491, gnl\|Hg17\|chr1 (44499888-44500326)
	56-491, gnl\|Mm7\|chr4 (116916628-116916203)