Non-Coding RNA Search

Pig2-113B10

Sequence:


               
               ATATATACTTTACATCGTTTTTAAATTAGAAGTTTCCAATCCACCTTTTTTTCCCTTTTT
CCTTTTTATAGTATATTAGGTATACACCCCAGATTTTTTGATCTGTAGTTGGCAAGTCTG
TATTTTGCAAATTCTATGCCTGTGGAGTAATTAACATGTTAGAgtcctctgtatttcctt
taaatttgtagttatatctagaaacttaattagattcaggtttATAGATAGTAATATGCT
CTTCCATCTGGAAGCATACAATGCCTGGTTGACTTTTTTTATGAGGTTAGCCACTAAGGT
GTTCAAGGCCTCAATGAATTCATTAATTCATTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATATATACTTTACATCGTTTTTAAATTAGAAGTTTCCAATCCACCTTTTTTTCCCTTTTT
CCTTTTTATAGTATATTAGGTATACACCCCAGATTTTTTGATCTGTAGTTGGCAAGTCTG
TATTTTGCAAATTCTATGCCTGTGGAGTAATTAACATGTTAGAgtcctctgtatttcctt
taaatttgtagttatatctagaaacttaattagattcaggtttATAGATAGTAATATGCT
CTTCCATCTGGAAGCATACAATGCCTGGTTGACTTTTTTTATGAGGTTAGCCACTAAGGT
GTTCAAGGCCTCAATGAATTCATTAATTCATTA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               195-324, + strand, RNAz p=0.977221

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               195-324, + strand, RNAz p=0.977221

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-324, gnl|bosTau2|chr14 (50039183-50039503)
               

               
               1-324, gnl|Hg17|chr8 (120818529-120818137)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-324, gnl|bosTau2|chr14 (50039183-50039503)
               

               
               1-324, gnl|Hg17|chr8 (120818529-120818137)

	1-324, gnl\|bosTau2\|chr14 (50039183-50039503)
	1-324, gnl\|Hg17\|chr8 (120818529-120818137)