Non-Coding RNA Search

Pig2-113K18

Sequence:


               
               AATgccggatccttaatccactgggtgatgccagggattgaaccctcaacctcccgggtc
ctagtcagattcgtttccgctgcgccatgacgggaacGCCTGGCCTCATTAATCTTTAAA
AGCTTCCTTGCTTCCTGGGACAAGACATCCCACATTTActtctaccttctttgcgccaga
cctgaaatctgccacttctccaaggagccctgcctcctttcggcaaagaatggtacttag
aaactaaaatctgAATATCCGGGGTCCTCATTTGAAAGATGTGGCACATCCTTTACAATA
TGGGGTCTTTGGGCCGTACCAGCAGGATCACTGCTTTATGGCTCAGAGGAGACAGCCTGG
AAGCTAGTCCTTCCACTGGCAACCGGTCTGGCCTTTTGGCTCCTGCCCAGGGAGGAGGAT
GTGGGAATTGGGGCTCANCATGTCAGGGACACACTGGGAGCCCCAGTCCTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AATgccggatccttaatccactgggtgatgccagggattgaaccctcaacctcccgggtc
ctagtcagattcgtttccgctgcgccatgacgggaacGCCTGGCCTCATTAATCTTTAAA
AGCTTCCTTGCTTCCTGGGACAAGACATCCCACATTTActtctaccttctttgcgccaga
cctgaaatctgccacttctccaaggagccctgcctcctttcggcaaagaatggtacttag
aaactaaaatctgAATATCCGGGGTCCTCATTTGAAAGATGTGGCACATCCTTTACAATA
TGGGGTCTTTGGGCCGTACCAGCAGGATCACTGCTTTATGGCTCAGAGGAGACAGCCTGG
AAGCTAGTCCTTCCACTGGCAACCGGTCTGGCCTTTTGGCTCCTGCCCAGGGAGGAGGAT
GTGGGAATTGGGGCTCANCATGTCAGGGACACACTGGGAGCCCCAGTCCTC

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               105-299, - strand, RNAz p=0.999996

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               105-299, - strand, RNAz p=0.999996

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               105-471, gnl|bosTau2|chr19 (37205881-37205531)
               

               
               105-471, gnl|Hg17|chr17 (40576097-40576483)
               

               
               105-471, gnl|Mm7|chr11 (103220150-103220489)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               105-471, gnl|bosTau2|chr19 (37205881-37205531)
               

               
               105-471, gnl|Hg17|chr17 (40576097-40576483)
               

               
               105-471, gnl|Mm7|chr11 (103220150-103220489)

	105-471, gnl\|bosTau2\|chr19 (37205881-37205531)
	105-471, gnl\|Hg17\|chr17 (40576097-40576483)
	105-471, gnl\|Mm7\|chr11 (103220150-103220489)