Pig2-114G23
|
ACTTAGAGAAGTGAAGACGGAGGAGAGAACGGACAGAGAGCCTCCTGGGTGGTAGGAAGC
TTCCCTGCGCCCCCACGCTAACCCCTGTGCCTCCGTCACAGCGAGGCGTTTCCATCAACC
AGTTCTGTAAGGAGTTCAACGAAAAGACAAAGGACATCAAAGAAGGCATTCCTCTGCCCA
CCAAGATTTTTGTGAAGGTGCGGAGTTGGGACGCTGACCCCCAGTTTCCTTCTCATTCTC
CCTCTTCTCCCCAGGTCCTGAAGCTGGTCGCTTGGGGTTGCTACTCTGCTTCTAACTTGG
GGCACGTGTCATCCTGTTCCTGGGCCCCACTGTCCCCATTTACACGGTGGAGACTAGTCC
GTATCTTTCCGGAGCCCCCCATCTACTGCCATATTGCAGATCTTAACTTTGCCCCTCCAG
CTTGCTGGGGCTTCCAGAGCAGAGTTGGGTCTGGAAGAGAGGTGACAGGGATGTTTATGG
CAGCCCGACAGGACATTTGAAATCAAAATTGGTCAACCCACTGTTTCCTACTTCCTGAAG
GCTGCTGCCGGGATTGAGAAGGGGGGCGCGG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
ACTTAGAGAAGTGAAGACGGAGGAGAGAACGGACAGAGAGCCTCCTGGGTGGTAGGAAGC
TTCCCTGCGCCCCCACGCTAACCCCTGTGCCTCCGTCACAGCGAGGCGTTTCCATCAACC
AGTTCTGTAAGGAGTTCAACGAAAAGACAAAGGACATCAAAGAAGGCATTCCTCTGCCCA
CCAAGATTTTTGTGAAGGTGCGGAGTTGGGACGCTGACCCCCAGTTTCCTTCTCATTCTC
CCTCTTCTCCCCAGGTCCTGAAGCTGGTCGCTTGGGGTTGCTACTCTGCTTCTAACTTGG
GGCACGTGTCATCCTGTTCCTGGGCCCCACTGTCCCCATTTACACGGTGGAGACTAGTCC
GTATCTTTCCGGAGCCCCCCATCTACTGCCATATTGCAGATCTTAACTTTGCCCCTCCAG
CTTGCTGGGGCTTCCAGAGCAGAGTTGGGTCTGGAAGAGAGGTGACAGGGATGTTTATGG
CAGCCCGACAGGACATTTGAAATCAAAATTGGTCAACCCACTGTTTCCTACTTCCTGAAG
GCTGCTGCCGGGATTGAGAAGGGGGGCGCGG
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
2-304, gnl|bosTau2|chr29 (40045716-40045427) |
|
2-304, gnl|Hg17|chr11 (65962404-65962115) |
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2-304, gnl|Mm7|chr19 (4857575-4857851) |
| |
|
309-476, gnl|bosTau2|chr29 (40045146-40044985) |
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309-476, gnl|canFam2|chr18 (53917190-53917070) |
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309-476, gnl|dasNov1|scaffold_78135 (2856-2747) |
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309-476, gnl|echTel1|scaffold_280076 (43860-43742) |
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309-476, gnl|hg17|chr11 (65961939-65962073) |
|
309-476, gnl|Hg17|chr11 (65962113-65961955) |
|
309-476, gnl|mm7|chr19 (4858018-4857900) |
|
309-476, gnl|panTro1|chr9 (67209241-67209375) |
|
309-476, gnl|rheMac2|chr14 (8014416-8014283) |
|
309-476, gnl|rn3|chr1 (207734686-207734569) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
2-304, gnl|bosTau2|chr29 (40045716-40045427) |
|
2-304, gnl|Hg17|chr11 (65962404-65962115) |
|
2-304, gnl|Mm7|chr19 (4857575-4857851) |
| |
|
309-476, gnl|bosTau2|chr29 (40045146-40044985) |
|
309-476, gnl|canFam2|chr18 (53917190-53917070) |
|
309-476, gnl|dasNov1|scaffold_78135 (2856-2747) |
|
309-476, gnl|echTel1|scaffold_280076 (43860-43742) |
|
309-476, gnl|hg17|chr11 (65961939-65962073) |
|
309-476, gnl|Hg17|chr11 (65962113-65961955) |
|
309-476, gnl|mm7|chr19 (4858018-4857900) |
|
309-476, gnl|panTro1|chr9 (67209241-67209375) |
|
309-476, gnl|rheMac2|chr14 (8014416-8014283) |
|
309-476, gnl|rn3|chr1 (207734686-207734569) |
