Non-Coding RNA Search

Pig2-114H19

Sequence:


               
               TTTAGTTGTGGTGGTATGATGTTTAATTGAGGAGTGACTTTTTTTCCAGAATGGAATCAT
TAGTTCCACTTGTACAGAGTTTGAAAAAACGGATGGAAGCACCAGACTATGAAATGGTTC
ACCAGGCTGGTCTAACCTGTGATTATTCAGAACTTCCTCACCATATCAGCACAGAAAAAG
AAATTGAATATCTTATTCAGTCTGTATATTATGTTCTAAAAAATTTACCAAAACCTACTC
TTGTGACAATTGCAAGGTAAGtgtggtagcttgaaaaacggccaaccacatgtgtccaca
tgctgatctccagaaccagtgaatatgttgccttatatggcaaaagggagtttgcagata
tgaataactcagcagtcttgaaaataaagaggttatcctggattatctgggtgagccctg
tgtaatcacaagggtccttatTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTAGTTGTGGTGGTATGATGTTTAATTGAGGAGTGACTTTTTTTCCAGAATGGAATCAT
TAGTTCCACTTGTACAGAGTTTGAAAAAACGGATGGAAGCACCAGACTATGAAATGGTTC
ACCAGGCTGGTCTAACCTGTGATTATTCAGAACTTCCTCACCATATCAGCACAGAAAAAG
AAATTGAATATCTTATTCAGTCTGTATATTATGTTCTAAAAAATTTACCAAAACCTACTC
TTGTGACAATTGCAAGGTAAGtgtggtagcttgaaaaacggccaaccacatgtgtccaca
tgctgatctccagaaccagtgaatatgttgccttatatggcaaaagggagtttgcagata
tgaataactcagcagtcttgaaaataaagaggttatcctggattatctgggtgagccctg
tgtaatcacaagggtccttatTA

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|61847886|ref|XP_606148.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61847886|ref|XP_606148.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               315-436, + strand, RNAz p=0.903058

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               315-436, + strand, RNAz p=0.903058

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               116-436, gnl|bosTau2|chr20 (27353829-27353509)
               

               
               116-436, gnl|Hg17|chr5 (31587156-31587471)
               

               
               116-436, gnl|Mm7|chr15 (12872035-12871734)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               116-436, gnl|bosTau2|chr20 (27353829-27353509)
               

               
               116-436, gnl|Hg17|chr5 (31587156-31587471)
               

               
               116-436, gnl|Mm7|chr15 (12872035-12871734)

	116-436, gnl\|bosTau2\|chr20 (27353829-27353509)
	116-436, gnl\|Hg17\|chr5 (31587156-31587471)
	116-436, gnl\|Mm7\|chr15 (12872035-12871734)