Non-Coding RNA Search

Pig2-114J23

Sequence:


               
               CATTGCAGCCAAGTGGGGAAGCCTCAAGCTTTCCAGAAGCACTGCGAAATAAGAACGGGC
CCCTCAGCAAGCTTTACGCCCGGGCCCCACCCCCACCTCCAGCCCCTGCCAGCTCTCAGA
AATGCCATGTAGTGAATGGGCAGGGCCCATCTTACAGGGCCTCACGTTCCACCAAAACCT
CCTACAAGGAGAAGGGCCAGGGGTCCCAGAGCCGTGGCCACCAGCCTCCCGAGAAGACCC
AAAAAGACAACCTCTGCCTTTTCGTGCCTGTGGTGAATTTGGAAAACATGTCCAGTCTCC
CGAAGCCCGACGGACACGGAATCAGGGTGGCCCCGCCCTCTGCTTTCCTCAGCCAGCCAG
GCAGCCTCGCCAAGGACTCCCCTGGAAAAAACCCCATGGCACCCCCTTCTAAAGAACCTC
CTGGCAGAGAAGGCATTGAGATAACCCCCAGCGAGGGCCTGAGTCACCGGGCTGAAGGCA
GCCCCCCTGAAAAGGAGCCTGGTGGGACCAGGCTGCCCCCTAAAACCCACCGGAAGATGG
CTCGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CATTGCAGCCAAGTGGGGAAGCCTCAAGCTTTCCAGAAGCACTGCGAAATAAGAACGGGC
CCCTCAGCAAGCTTTACGCCCGGGCCCCACCCCCACCTCCAGCCCCTGCCAGCTCTCAGA
AATGCCATGTAGTGAATGGGCAGGGCCCATCTTACAGGGCCTCACGTTCCACCAAAACCT
CCTACAAGGAGAAGGGCCAGGGGTCCCAGAGCCGTGGCCACCAGCCTCCCGAGAAGACCC
AAAAAGACAACCTCTGCCTTTTCGTGCCTGTGGTGAATTTGGAAAACATGTCCAGTCTCC
CGAAGCCCGACGGACACGGAATCAGGGTGGCCCCGCCCTCTGCTTTCCTCAGCCAGCCAG
GCAGCCTCGCCAAGGACTCCCCTGGAAAAAACCCCATGGCACCCCCTTCTAAAGAACCTC
CTGGCAGAGAAGGCATTGAGATAACCCCCAGCGAGGGCCTGAGTCACCGGGCTGAAGGCA
GCCCCCCTGAAAAGGAGCCTGGTGGGACCAGGCTGCCCCCTAAAACCCACCGGAAGATGG
CTCGG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|21748608|dbj|BAC03441.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|21748608|dbj|BAC03441.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               335-544, - strand, RNAz p=0.901808

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               335-544, - strand, RNAz p=0.901808

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               256-544, gnl|bosTau2|chr3 (25974352-25974064)
               

               
               256-544, gnl|Hg17|chr1 (109742181-109742469)
               

               
               256-544, gnl|Mm7|chr3 (108025398-108025110)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               256-544, gnl|bosTau2|chr3 (25974352-25974064)
               

               
               256-544, gnl|Hg17|chr1 (109742181-109742469)
               

               
               256-544, gnl|Mm7|chr3 (108025398-108025110)

	256-544, gnl\|bosTau2\|chr3 (25974352-25974064)
	256-544, gnl\|Hg17\|chr1 (109742181-109742469)
	256-544, gnl\|Mm7\|chr3 (108025398-108025110)