Pig2-114J24
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCAAGGTTCTCACTTGCCTGGCCCGCCTCTTCACCGCCTACCTGCAGCTCTATAGAGGCT TCACCTTGGGCGTGGAGGACATTTTGGTCAAGCCGAGGGCTGATGTCCGGAGACACAGGA TCATTGAAGAGTCCACCCGCTGTGGTCCCCGGGCTGTCAGGGCCGCATTAAACTTGCCAG AAGCGGCATCGTGTGATGAAGTCCGAGGGAAATGGCAGGATGCCCATCTGAGCAAAGACC AGAGGGATTTTAACATGATTGATCTGAAGTTCAAGGAGGAAGTGAACCATCACAGCAATG AAATTAACAAGGCGTGCATGCCTTTGGGCCTGCACAGACAGTTCCCAGAGAACAACTTGC AGATGATGGTCCAGTCGGGAGCCAAGGGTTCAACTGTGAACACCATGCAGATCTCGTGCC TGCTGGGTCAGATCGAACTGGAAGGCCGGAGACCCCCCACTGATGGCATCCGGCAAGTCT CTGCCCTGCTTCGAGCCTTATGAGTTCACCCCCAGGGCTGGCGGCTTCGTCACTGGCAGA TTCCTTACAGGCATCAGGCCTCCTGAGTTCTTCTTCCACTGCATGGCCGG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCAAGGTTCTCACTTGCCTGGCCCGCCTCTTCACCGCCTACCTGCAGCTCTATAGAGGCT TCACCTTGGGCGTGGAGGACATTTTGGTCAAGCCGAGGGCTGATGTCCGGAGACACAGGA TCATTGAAGAGTCCACCCGCTGTGGTCCCCGGGCTGTCAGGGCCGCATTAAACTTGCCAG AAGCGGCATCGTGTGATGAAGTCCGAGGGAAATGGCAGGATGCCCATCTGAGCAAAGACC AGAGGGATTTTAACATGATTGATCTGAAGTTCAAGGAGGAAGTGAACCATCACAGCAATG AAATTAACAAGGCGTGCATGCCTTTGGGCCTGCACAGACAGTTCCCAGAGAACAACTTGC AGATGATGGTCCAGTCGGGAGCCAAGGGTTCAACTGTGAACACCATGCAGATCTCGTGCC TGCTGGGTCAGATCGAACTGGAAGGCCGGAGACCCCCCACTGATGGCATCCGGCAAGTCT CTGCCCTGCTTCGAGCCTTATGAGTTCACCCCCAGGGCTGGCGGCTTCGTCACTGGCAGA TTCCTTACAGGCATCAGGCCTCCTGAGTTCTTCTTCCACTGCATGGCCGG |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 152-310, - strand, RNAz p=0.742856 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 152-310, - strand, RNAz p=0.742856 |
| Aligned organism(s): 32 entry(ies) | More info |
| Aligned organism(s): 32 entry(ies) | Help | Less info |
| 152-312, gnl|bosTau2|chr11 (33872302-33872462) | |
| 152-312, gnl|canFam2|chr17 (42111641-42111525) | |
| 152-312, gnl|danRer3|chr23 (13891112-13891235) | |
| 152-312, gnl|echTel1|scaffold_294410 (89103-88986) | |
| 152-312, gnl|fr1|chrUn (266031396-266031511) | |
| 152-312, gnl|galGal2|chr4 (85524303-85524419) | |
| 152-312, gnl|hg17|chr2 (86187658-86187774) | |
| 152-312, gnl|Hg17|chr2 (86187824-86187664) | |
| 152-312, gnl|mm7|chr6 (71968861-71968745) | |
| 152-312, gnl|Mm7|chr6 (71968693-71968853) | |
| 152-312, gnl|monDom2|scaffold_63 (277902-278018) | |
| 152-312, gnl|oryCun1|scaffold_102110 (7515-7399) | |
| 152-312, gnl|panTro1|chr12 (89066020-89066136) | |
| 152-312, gnl|rheMac2|chr13 (86636384-86636500) | |
| 152-312, gnl|rn3|chr4 (105473388-105473272) | |
| 152-312, gnl|tetNig1|chrUn_random (135146258-135146368) | |
| 152-312, gnl|xenTro1|scaffold_149 (1209967-1209855) | |
| 408-575, gnl|bosTau2|chr11 (33875218-33875385) | |
| 408-575, gnl|canFam2|chr17 (42114431-42114316) | |
| 408-575, gnl|danRer3|chr23 (13888871-13888969) | |
| 408-575, gnl|fr1|chrUn (329852444-329852539) | |
| 408-575, gnl|galGal2|chr4 (85523260-85523376) | |
| 408-575, gnl|hg17|chr2 (86184375-86184491) | |
| 408-575, gnl|Hg17|chr2 (86184553-86184388) | |
| 408-575, gnl|loxAfr1|scaffold_16405 (26356-26253) | |
| 408-575, gnl|mm7|chr6 (71972791-71972685) | |
| 408-575, gnl|Mm7|chr6 (71972621-71972786) | |
| 408-575, gnl|monDom2|scaffold_63 (277000-277104) | |
| 408-575, gnl|panTro1|chr12 (89062725-89062841) | |
| 408-575, gnl|rheMac2|chr13 (86633112-86633226) | |
| 408-575, gnl|rn3|chr4 (105477204-105477098) | |
| 408-575, gnl|tetNig1|chrUn_random (135142835-135142930) |
| Aligned organism(s): 32 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 152-312, gnl|bosTau2|chr11 (33872302-33872462) | |
| 152-312, gnl|canFam2|chr17 (42111641-42111525) | |
| 152-312, gnl|danRer3|chr23 (13891112-13891235) | |
| 152-312, gnl|echTel1|scaffold_294410 (89103-88986) | |
| 152-312, gnl|fr1|chrUn (266031396-266031511) | |
| 152-312, gnl|galGal2|chr4 (85524303-85524419) | |
| 152-312, gnl|hg17|chr2 (86187658-86187774) | |
| 152-312, gnl|Hg17|chr2 (86187824-86187664) | |
| 152-312, gnl|mm7|chr6 (71968861-71968745) | |
| 152-312, gnl|Mm7|chr6 (71968693-71968853) | |
| 152-312, gnl|monDom2|scaffold_63 (277902-278018) | |
| 152-312, gnl|oryCun1|scaffold_102110 (7515-7399) | |
| 152-312, gnl|panTro1|chr12 (89066020-89066136) | |
| 152-312, gnl|rheMac2|chr13 (86636384-86636500) | |
| 152-312, gnl|rn3|chr4 (105473388-105473272) | |
| 152-312, gnl|tetNig1|chrUn_random (135146258-135146368) | |
| 152-312, gnl|xenTro1|scaffold_149 (1209967-1209855) | |
| 408-575, gnl|bosTau2|chr11 (33875218-33875385) | |
| 408-575, gnl|canFam2|chr17 (42114431-42114316) | |
| 408-575, gnl|danRer3|chr23 (13888871-13888969) | |
| 408-575, gnl|fr1|chrUn (329852444-329852539) | |
| 408-575, gnl|galGal2|chr4 (85523260-85523376) | |
| 408-575, gnl|hg17|chr2 (86184375-86184491) | |
| 408-575, gnl|Hg17|chr2 (86184553-86184388) | |
| 408-575, gnl|loxAfr1|scaffold_16405 (26356-26253) | |
| 408-575, gnl|mm7|chr6 (71972791-71972685) | |
| 408-575, gnl|Mm7|chr6 (71972621-71972786) | |
| 408-575, gnl|monDom2|scaffold_63 (277000-277104) | |
| 408-575, gnl|panTro1|chr12 (89062725-89062841) | |
| 408-575, gnl|rheMac2|chr13 (86633112-86633226) | |
| 408-575, gnl|rn3|chr4 (105477204-105477098) | |
| 408-575, gnl|tetNig1|chrUn_random (135142835-135142930) |