Non-Coding RNA Search

Pig2-114N13

Sequence:


               
               ACCAGCAGGTGTTTCACATCAGCTGCTTCCGTTGTTCCTATTGCAACAACAAACTCAGTC
TAGGAACATATGCTTCTTTACATGGGAGAATCTATTGCAAGCCTCACTTCAATCAACTCT
TTAAATCTAAAGGCAACTATGACGAAGGCTTTGGACACAGACCACACAAGGATCTGTGGG
CAAGCAAACTGGAAAATGAAGAGACGTTGGAGAGACCAGCCCAGCTTCCAAATGCAGCGG
AGATCCCTCAGAGCCCGGGGGTAGAAGACGCCCCCATTGCTAAGGTGGGTGTGCTGACTG
CAAGTATGGAAGCCAAGGCCTCCTCCCAGCTGGAGAAAGAAGACAAGCCAGCTGAAACCA
AGAAGCTGAGGATCGCCTGGCCGCCCCCGACTGAGCTTAGCAGTTCAGGGAGTGCTTTGG
AGGAAGGCATCAAAGTTTCTAAGCCGAAGTGGCCTCCTGAGGATGAAGTCAGCAAGCCTG
AAGCTCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACCAGCAGGTGTTTCACATCAGCTGCTTCCGTTGTTCCTATTGCAACAACAAACTCAGTC
TAGGAACATATGCTTCTTTACATGGGAGAATCTATTGCAAGCCTCACTTCAATCAACTCT
TTAAATCTAAAGGCAACTATGACGAAGGCTTTGGACACAGACCACACAAGGATCTGTGGG
CAAGCAAACTGGAAAATGAAGAGACGTTGGAGAGACCAGCCCAGCTTCCAAATGCAGCGG
AGATCCCTCAGAGCCCGGGGGTAGAAGACGCCCCCATTGCTAAGGTGGGTGTGCTGACTG
CAAGTATGGAAGCCAAGGCCTCCTCCCAGCTGGAGAAAGAAGACAAGCCAGCTGAAACCA
AGAAGCTGAGGATCGCCTGGCCGCCCCCGACTGAGCTTAGCAGTTCAGGGAGTGCTTTGG
AGGAAGGCATCAAAGTTTCTAAGCCGAAGTGGCCTCCTGAGGATGAAGTCAGCAAGCCTG
AAGCTCC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               Q58CY9_BOVIN

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q58CY9_BOVIN

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               215-414, - strand, RNAz p=0.827273

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               215-414, - strand, RNAz p=0.827273

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               56-487, gnl|bosTau2|chr5 (22961738-22962169)
               

               
               56-487, gnl|Hg17|chr12 (48858122-48857691)
               

               
               56-487, gnl|Mm7|chr15 (99766538-99766107)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               56-487, gnl|bosTau2|chr5 (22961738-22962169)
               

               
               56-487, gnl|Hg17|chr12 (48858122-48857691)
               

               
               56-487, gnl|Mm7|chr15 (99766538-99766107)

	56-487, gnl\|bosTau2\|chr5 (22961738-22962169)
	56-487, gnl\|Hg17\|chr12 (48858122-48857691)
	56-487, gnl\|Mm7\|chr15 (99766538-99766107)