Non-Coding RNA Search

Pig2-114P20

Sequence:


               
               TTTAACTTAATCCCTTTGATTTGCTTATGGCCAGAAAGGGTAAATTAATGAACAAGTCTG
TGTCTCTTGATTCCCAAAAGTACTATTTTTCCTTAAAGGAGAAAAAACTAGAATGCATGC
GTGGCTTAAGTCATTTATCAAAAATACTCATGTTTTAAAGATATTTGCCAAAAATATTCA
AGTTTGAGTTCATTATAAACCTGAACTTTGTTGTTCAGTGGGCATAGTTCACATGATCTG
CACGTCTGCTTTTATGTCTTTTTGCTTTTACAGAAAGCTTTGCCAGCAGTACATCTCTTT
TCTGACTCGTTATTTCACATTCACAACCTCTGTGGAGTATCATTTCTGCACTTTGCTGGC
AAAACAAAATAGAAAACTGTTGTGCTGCTGTCAGCATTAACATCCCCAAATTGACATACA
TTCACACTTGTAGATTTTAAAAATACATTCTGCGCAGATTTGATCAATGAACTATCAGAG
GAATCTAAAAGGGGCATTTAAGACCATATTGCTTTTTCCTTGAAGTGAAACTGTTCTAAA
TATTTTGTTTTTTAAACAATGAAAACCCTACCTCATATA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTAACTTAATCCCTTTGATTTGCTTATGGCCAGAAAGGGTAAATTAATGAACAAGTCTG
TGTCTCTTGATTCCCAAAAGTACTATTTTTCCTTAAAGGAGAAAAAACTAGAATGCATGC
GTGGCTTAAGTCATTTATCAAAAATACTCATGTTTTAAAGATATTTGCCAAAAATATTCA
AGTTTGAGTTCATTATAAACCTGAACTTTGTTGTTCAGTGGGCATAGTTCACATGATCTG
CACGTCTGCTTTTATGTCTTTTTGCTTTTACAGAAAGCTTTGCCAGCAGTACATCTCTTT
TCTGACTCGTTATTTCACATTCACAACCTCTGTGGAGTATCATTTCTGCACTTTGCTGGC
AAAACAAAATAGAAAACTGTTGTGCTGCTGTCAGCATTAACATCCCCAAATTGACATACA
TTCACACTTGTAGATTTTAAAAATACATTCTGCGCAGATTTGATCAATGAACTATCAGAG
GAATCTAAAAGGGGCATTTAAGACCATATTGCTTTTTCCTTGAAGTGAAACTGTTCTAAA
TATTTTGTTTTTTAAACAATGAAAACCCTACCTCATATA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               253-372, - strand, RNAz p=0.911945

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               253-372, - strand, RNAz p=0.911945

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               135-579, gnl|bosTau2|chr1 (29231110-29231568)
               

               
               135-579, gnl|Hg17|chr3 (108993978-108994444)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               135-579, gnl|bosTau2|chr1 (29231110-29231568)
               

               
               135-579, gnl|Hg17|chr3 (108993978-108994444)

	135-579, gnl\|bosTau2\|chr1 (29231110-29231568)
	135-579, gnl\|Hg17\|chr3 (108993978-108994444)