Pig2-115F08
|
ACAGACCCTGCTGATCCATGGGGATGGCCAAATGTTCCGACACGTTCTCAACTTCCTGAG
ACTTGGCAAACTGTTTTTACCATCTGAATTTAAGGAATGGCCCCTTCTCTGCCAGGAGGT
GGAGGAGTACCGCATCCCATCCCTCTCAGAAGCCCTTGTCCAATGTGAGGCATACAAGTC
ATGGATCCAGGAGAAAGAATCTGAAAATGAAGAAGCGTTTCCCATCAGGAGGCTGCACAT
GGTGACAGAAGGGCAAGGGTCACTGGTAGAGTTCAGTAGAGATGCCAAAGAAACCACAGC
TTGCATGCCTATGGAGTTCCAAGACGGCAGTGACAGGACTCCATGGAACAAAGCCAAGGG
GACCCCGGCCAGGTCCAGCCAGATGGAGGAGACTGAGCAGTACTCCCGCACAATCCAGGT
GTCCTTGTGCGGAGGGGCAAAGAGGGCAAGCAATCCCAGCACATACTCACACTGCCCTGG
CCTGTGTGCCAACCCT
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Blue-coloured subsequences are predicted RNA structures by RNAz
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ACAGACCCTGCTGATCCATGGGGATGGCCAAATGTTCCGACACGTTCTCAACTTCCTGAG
ACTTGGCAAACTGTTTTTACCATCTGAATTTAAGGAATGGCCCCTTCTCTGCCAGGAGGT
GGAGGAGTACCGCATCCCATCCCTCTCAGAAGCCCTTGTCCAATGTGAGGCATACAAGTC
ATGGATCCAGGAGAAAGAATCTGAAAATGAAGAAGCGTTTCCCATCAGGAGGCTGCACAT
GGTGACAGAAGGGCAAGGGTCACTGGTAGAGTTCAGTAGAGATGCCAAAGAAACCACAGC
TTGCATGCCTATGGAGTTCCAAGACGGCAGTGACAGGACTCCATGGAACAAAGCCAAGGG
GACCCCGGCCAGGTCCAGCCAGATGGAGGAGACTGAGCAGTACTCCCGCACAATCCAGGT
GTCCTTGTGCGGAGGGGCAAAGAGGGCAAGCAATCCCAGCACATACTCACACTGCCCTGG
CCTGTGTGCCAACCCT
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
175-292, gnl|bosTau2|chr18 (28695195-28695312) |
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175-292, gnl|Hg17|chr16 (65886101-65885984) |
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175-292, gnl|Mm7|chr8 (103986522-103986405) |
| |
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293-496, gnl|bosTau2|chr18 (28695692-28695895) |
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293-496, gnl|canFam2|chr5 (85097319-85097001) |
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293-496, gnl|dasNov1|scaffold_33436 (4-325) |
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293-496, gnl|echTel1|scaffold_316751 (36710-36938) |
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293-496, gnl|hg17|chr16 (65885369-65885688) |
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293-496, gnl|Hg17|chr16 (65885575-65885372) |
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293-496, gnl|loxAfr1|scaffold_26781 (11106-10790) |
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293-496, gnl|mm7|chr8 (103985810-103986123) |
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293-496, gnl|Mm7|chr8 (103986016-103985813) |
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293-496, gnl|monDom2|scaffold_23 (19569176-19568850) |
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293-496, gnl|panTro1|chr18 (60145058-60145377) |
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293-496, gnl|rheMac2|chr20 (65595119-65595438) |
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293-496, gnl|rn3|chr19 (35206624-35206918) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
175-292, gnl|bosTau2|chr18 (28695195-28695312) |
|
175-292, gnl|Hg17|chr16 (65886101-65885984) |
|
175-292, gnl|Mm7|chr8 (103986522-103986405) |
| |
|
293-496, gnl|bosTau2|chr18 (28695692-28695895) |
|
293-496, gnl|canFam2|chr5 (85097319-85097001) |
|
293-496, gnl|dasNov1|scaffold_33436 (4-325) |
|
293-496, gnl|echTel1|scaffold_316751 (36710-36938) |
|
293-496, gnl|hg17|chr16 (65885369-65885688) |
|
293-496, gnl|Hg17|chr16 (65885575-65885372) |
|
293-496, gnl|loxAfr1|scaffold_26781 (11106-10790) |
|
293-496, gnl|mm7|chr8 (103985810-103986123) |
|
293-496, gnl|Mm7|chr8 (103986016-103985813) |
|
293-496, gnl|monDom2|scaffold_23 (19569176-19568850) |
|
293-496, gnl|panTro1|chr18 (60145058-60145377) |
|
293-496, gnl|rheMac2|chr20 (65595119-65595438) |
|
293-496, gnl|rn3|chr19 (35206624-35206918) |
