Pig2-115G01
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TCTCCTGGGCTCCTCTTCTATTCCCTGCGCACTCTGACCACCATGGCTCCTTATCTCGGC ACTGATGATGTGCCTCTTGCGCGGATGTTGGTGCCCAGGCTCATCACGGCCGTGCAGGCT TTGATCCCTGTAGATGAGGCAAAGGCCTGTGAGGCCTTGGAGGCCCTGGATGAACTGCTG GAGTCAGAGGTGCCCATCATCACCTCCCACCTCTCAGAGGTCCTCACATTCTGCCTGGAG GTGGCTAAAAATGTGGCCTTGGGTGACGCAATACGTGTGCGTATTCTCTGCTGCCTCACA TTCTTGGTCAAAGTGAAGAGCAAGGCTTTACTGAAGAATCGTCTCCTGCCACCCTTGCTG CACACCCTTTTCCCCATCATGGCTGCTGAGCCCCCCCTGGGCCAGCTGGATCCTGAGGAC CAGGATTC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TCTCCTGGGCTCCTCTTCTATTCCCTGCGCACTCTGACCACCATGGCTCCTTATCTCGGC ACTGATGATGTGCCTCTTGCGCGGATGTTGGTGCCCAGGCTCATCACGGCCGTGCAGGCT TTGATCCCTGTAGATGAGGCAAAGGCCTGTGAGGCCTTGGAGGCCCTGGATGAACTGCTG GAGTCAGAGGTGCCCATCATCACCTCCCACCTCTCAGAGGTCCTCACATTCTGCCTGGAG GTGGCTAAAAATGTGGCCTTGGGTGACGCAATACGTGTGCGTATTCTCTGCTGCCTCACA TTCTTGGTCAAAGTGAAGAGCAAGGCTTTACTGAAGAATCGTCTCCTGCCACCCTTGCTG CACACCCTTTTCCCCATCATGGCTGCTGAGCCCCCCCTGGGCCAGCTGGATCCTGAGGAC CAGGATTC |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 137-243, - strand, RNAz p=0.942911 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 137-243, - strand, RNAz p=0.942911 |
| Aligned organism(s): 30 entry(ies) | More info |
| Aligned organism(s): 30 entry(ies) | Help | Less info |
| 137-243, gnl|bosTau2|chr10 (12300619-12300725) | |
| 137-243, gnl|canFam2|chr8 (7183987-7184057) | |
| 137-243, gnl|danRer3|chr20 (52176190-52176120) | |
| 137-243, gnl|echTel1|scaffold_316077 (62256-62326) | |
| 137-243, gnl|fr1|chrUn (82315418-82315348) | |
| 137-243, gnl|hg17|chr14 (23725920-23725990) | |
| 137-243, gnl|Hg17|chr14 (23726027-23725921) | |
| 137-243, gnl|loxAfr1|scaffold_45617 (5874-5944) | |
| 137-243, gnl|mm7|chr14 (50500853-50500923) | |
| 137-243, gnl|Mm7|chr14 (50500960-50500854) | |
| 137-243, gnl|monDom2|scaffold_12 (25572935-25572865) | |
| 137-243, gnl|oryCun1|scaffold_178102 (68768-68838) | |
| 137-243, gnl|panTro1|chr15_random (3875733-3875803) | |
| 137-243, gnl|rheMac2|chr7 (87081996-87082066) | |
| 137-243, gnl|rn3|chr15 (33784794-33784864) | |
| 137-243, gnl|tetNig1|chrUn_random (112565392-112565461) | |
| 323-426, gnl|bosTau2|chr10 (12301147-12301250) | |
| 323-426, gnl|canFam2|chr8 (7183195-7183316) | |
| 323-426, gnl|dasNov1|scaffold_139560 (10240-10361) | |
| 323-426, gnl|echTel1|scaffold_316077 (61697-61818) | |
| 323-426, gnl|fr1|chrUn (82316168-82316059) | |
| 323-426, gnl|hg17|chr14 (23725346-23725467) | |
| 323-426, gnl|Hg17|chr14 (23725499-23725396) | |
| 323-426, gnl|mm7|chr14 (50500326-50500447) | |
| 323-426, gnl|Mm7|chr14 (50500479-50500376) | |
| 323-426, gnl|monDom2|scaffold_12 (25573567-25573446) | |
| 323-426, gnl|oryCun1|scaffold_178102 (67928-68046) | |
| 323-426, gnl|panTro1|chr15_random (3875159-3875280) | |
| 323-426, gnl|rheMac2|chr7 (87081423-87081544) | |
| 323-426, gnl|rn3|chr15 (33784302-33784423) |
| Aligned organism(s): 30 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 137-243, gnl|bosTau2|chr10 (12300619-12300725) | |
| 137-243, gnl|canFam2|chr8 (7183987-7184057) | |
| 137-243, gnl|danRer3|chr20 (52176190-52176120) | |
| 137-243, gnl|echTel1|scaffold_316077 (62256-62326) | |
| 137-243, gnl|fr1|chrUn (82315418-82315348) | |
| 137-243, gnl|hg17|chr14 (23725920-23725990) | |
| 137-243, gnl|Hg17|chr14 (23726027-23725921) | |
| 137-243, gnl|loxAfr1|scaffold_45617 (5874-5944) | |
| 137-243, gnl|mm7|chr14 (50500853-50500923) | |
| 137-243, gnl|Mm7|chr14 (50500960-50500854) | |
| 137-243, gnl|monDom2|scaffold_12 (25572935-25572865) | |
| 137-243, gnl|oryCun1|scaffold_178102 (68768-68838) | |
| 137-243, gnl|panTro1|chr15_random (3875733-3875803) | |
| 137-243, gnl|rheMac2|chr7 (87081996-87082066) | |
| 137-243, gnl|rn3|chr15 (33784794-33784864) | |
| 137-243, gnl|tetNig1|chrUn_random (112565392-112565461) | |
| 323-426, gnl|bosTau2|chr10 (12301147-12301250) | |
| 323-426, gnl|canFam2|chr8 (7183195-7183316) | |
| 323-426, gnl|dasNov1|scaffold_139560 (10240-10361) | |
| 323-426, gnl|echTel1|scaffold_316077 (61697-61818) | |
| 323-426, gnl|fr1|chrUn (82316168-82316059) | |
| 323-426, gnl|hg17|chr14 (23725346-23725467) | |
| 323-426, gnl|Hg17|chr14 (23725499-23725396) | |
| 323-426, gnl|mm7|chr14 (50500326-50500447) | |
| 323-426, gnl|Mm7|chr14 (50500479-50500376) | |
| 323-426, gnl|monDom2|scaffold_12 (25573567-25573446) | |
| 323-426, gnl|oryCun1|scaffold_178102 (67928-68046) | |
| 323-426, gnl|panTro1|chr15_random (3875159-3875280) | |
| 323-426, gnl|rheMac2|chr7 (87081423-87081544) | |
| 323-426, gnl|rn3|chr15 (33784302-33784423) |