Non-Coding RNA Search

Pig2-115H23

Sequence:


               
               GCCGTGGAGCCCCTATTAAGTGGGGAGGGCAAGGGGAGGCGTTTATCCATTCACCGTATT
CAGATGTACATCCCATGTCCATGAAAATTCATGGGTCCTGTGTCGTATTACATAACCTCG
GGGCCAAATTCAGTCCTTGAATGTGCATGCACAAGCCCAAATGCACTCGATGAAGAGCCC
CACATGCTCTCCAAAGGCTGCAATTAGCCTTTCCACACAGCTCAAGGATTCCGGGGGAAG
GAGTCACCACAGTCTTTCCCCAAACCGAGCTTCCAGAAGGAAGCACCTGTCTGAAAATTA
GAACCAGCTCTGCCTCTTACTTTGACTCCAATTTGACAGCAATTCTAATGATGATGCATT
ATTAATAAGGGCTAGAATCATCTGTCTGGATGAAAAGCCTTTTCACGCAGCCCACATGCA
CTGAGTTGAATTTGTCTGTCCTCTTTGCAAAGGATGTTGTTGGAACCGGGAGGACCATGA
AAGCGTTGCTCAGTAGCATAGAGAAATACAAGCCCAACATGATTAAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCCGTGGAGCCCCTATTAAGTGGGGAGGGCAAGGGGAGGCGTTTATCCATTCACCGTATT
CAGATGTACATCCCATGTCCATGAAAATTCATGGGTCCTGTGTCGTATTACATAACCTCG
GGGCCAAATTCAGTCCTTGAATGTGCATGCACAAGCCCAAATGCACTCGATGAAGAGCCC
CACATGCTCTCCAAAGGCTGCAATTAGCCTTTCCACACAGCTCAAGGATTCCGGGGGAAG
GAGTCACCACAGTCTTTCCCCAAACCGAGCTTCCAGAAGGAAGCACCTGTCTGAAAATTA
GAACCAGCTCTGCCTCTTACTTTGACTCCAATTTGACAGCAATTCTAATGATGATGCATT
ATTAATAAGGGCTAGAATCATCTGTCTGGATGAAAAGCCTTTTCACGCAGCCCACATGCA
CTGAGTTGAATTTGTCTGTCCTCTTTGCAAAGGATGTTGTTGGAACCGGGAGGACCATGA
AAGCGTTGCTCAGTAGCATAGAGAAATACAAGCCCAACATGATTAAG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               124-240, - strand, RNAz p=0.814176

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               124-240, - strand, RNAz p=0.814176

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               46-527, gnl|bosTau2|chr13 (13984126-13983653)
               

               
               46-527, gnl|Hg17|chr10 (25186329-25185856)
               

               
               46-527, gnl|Mm7|chr2 (21114266-21113798)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               46-527, gnl|bosTau2|chr13 (13984126-13983653)
               

               
               46-527, gnl|Hg17|chr10 (25186329-25185856)
               

               
               46-527, gnl|Mm7|chr2 (21114266-21113798)

	46-527, gnl\|bosTau2\|chr13 (13984126-13983653)
	46-527, gnl\|Hg17\|chr10 (25186329-25185856)
	46-527, gnl\|Mm7\|chr2 (21114266-21113798)