Non-Coding RNA Search

Pig2-115J18

Sequence:


               
               TGGGCTGCGATCCCTTACGGTTAGGCACATGGCGCAGGTAGAGGCCGTGGGTGCTCGTGG
AGGAAGCAGCGTATGGGGTTGGGCTGGGCTGCCCCGCCCCGAGCGGGGTACAGACCGGGA
AGGGAGGAGAACGACACAGGCTTGGGCTTTGGGACCTGCGCTATTGGGCAGCAGGGGCAG
CGGCTCCGCTTCCTGCCCTCCCGGCCCGCCTCGAATCCCCGGGTCATAGCAGTATGGATA
TCCTGGAGGGAGGAGCTGGCCCAGAGCCCCCGGGGCCCACTTTCTGTTGCTACATGAGGA
TCTGCTAATTGGGGTGTTGGGGTGTGGGCGGGTGCGGCCTGCCTATGGGATTTGGCACCT
GAGGAGGTGAGTCATAGGTGCACCTGCAAAGTTCACCTGCAACCGCTTGTCACGGTGGGA
CCGGCGGGCATTCATTCATCTGCGTCTCTCAGATCAGGCCAGTAAAATGAGACGGTAGCA
CACGTCTCAGTTCACGTGCTTGGGGAATGTTACCTCACAGGGCATCAAGGCTAGAATGGG
GACCAGCAGGTTCAGCCCTGCCCTCACAGAACTAACGGCCTAGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGGGCTGCGATCCCTTACGGTTAGGCACATGGCGCAGGTAGAGGCCGTGGGTGCTCGTGG
AGGAAGCAGCGTATGGGGTTGGGCTGGGCTGCCCCGCCCCGAGCGGGGTACAGACCGGGA
AGGGAGGAGAACGACACAGGCTTGGGCTTTGGGACCTGCGCTATTGGGCAGCAGGGGCAG
CGGCTCCGCTTCCTGCCCTCCCGGCCCGCCTCGAATCCCCGGGTCATAGCAGTATGGATA
TCCTGGAGGGAGGAGCTGGCCCAGAGCCCCCGGGGCCCACTTTCTGTTGCTACATGAGGA
TCTGCTAATTGGGGTGTTGGGGTGTGGGCGGGTGCGGCCTGCCTATGGGATTTGGCACCT
GAGGAGGTGAGTCATAGGTGCACCTGCAAAGTTCACCTGCAACCGCTTGTCACGGTGGGA
CCGGCGGGCATTCATTCATCTGCGTCTCTCAGATCAGGCCAGTAAAATGAGACGGTAGCA
CACGTCTCAGTTCACGTGCTTGGGGAATGTTACCTCACAGGGCATCAAGGCTAGAATGGG
GACCAGCAGGTTCAGCCCTGCCCTCACAGAACTAACGGCCTAGT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               309-427, + strand, RNAz p=0.514071

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               309-427, + strand, RNAz p=0.514071

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               2-429, gnl|bosTau2|chr7 (4716223-4715795)
               

               
               2-429, gnl|Hg17|chr19 (17691563-17692025)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-429, gnl|bosTau2|chr7 (4716223-4715795)
               

               
               2-429, gnl|Hg17|chr19 (17691563-17692025)

	2-429, gnl\|bosTau2\|chr7 (4716223-4715795)
	2-429, gnl\|Hg17\|chr19 (17691563-17692025)