Non-Coding RNA Search

Pig2-116J19

Sequence:


               
               GGGCAGAGACCCTGCATCTCCAGAGCCCACCTGTTTCAGCCCCAAGAAAACCCACTGGTT
CACATCTAAGTGTGGATATGTGGCTGCAGAGCAAGCAGAGGCTGATAGGGCTGTCCTGCC
GGGGATCCTTCTCCAGGCTCAGACTGGGTCTGGATGCAGGGTAGGCCGGCTTTGCTTTCT
GGAGCCTGGGTGGCAGTGGGGAGAGGCTTTCCTTACCCGTCCCCGTTGGGTACCCAGCCT
TGCCCGCGGCGCCAGCCACTCCTCCAGGCCCAAAGCCTGCGAAATGAGAGGCTCAGTGGG
CATCCATGAGGATCTCACCGCGGTTGCCCCCTCCCTGCCCTTCAAGGGCCAGGCCACCCA
GAGTCTCCACCTGTCACCCCCAGCCACAGTTAAACGCAAATGTGTCTGGGATGGTTGTTC
CCCTTTTAGAGACAAACACACTGCGGCCCGGGGAAGAAACTGGTTCTCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGGCAGAGACCCTGCATCTCCAGAGCCCACCTGTTTCAGCCCCAAGAAAACCCACTGGTT
CACATCTAAGTGTGGATATGTGGCTGCAGAGCAAGCAGAGGCTGATAGGGCTGTCCTGCC
GGGGATCCTTCTCCAGGCTCAGACTGGGTCTGGATGCAGGGTAGGCCGGCTTTGCTTTCT
GGAGCCTGGGTGGCAGTGGGGAGAGGCTTTCCTTACCCGTCCCCGTTGGGTACCCAGCCT
TGCCCGCGGCGCCAGCCACTCCTCCAGGCCCAAAGCCTGCGAAATGAGAGGCTCAGTGGG
CATCCATGAGGATCTCACCGCGGTTGCCCCCTCCCTGCCCTTCAAGGGCCAGGCCACCCA
GAGTCTCCACCTGTCACCCCCAGCCACAGTTAAACGCAAATGTGTCTGGGATGGTTGTTC
CCCTTTTAGAGACAAACACACTGCGGCCCGGGGAAGAAACTGGTTCTCC

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               184-356, - strand, RNAz p=0.979541

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               184-356, - strand, RNAz p=0.979541

Predicted microRNA(s): 1 entry(ies)

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Predicted microRNA(s): 1 entry(ies)

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               302-379, + strand, RNAmicro p=0.974654

Predicted microRNA(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro


               
               302-379, + strand, RNAmicro p=0.974654

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               10-459, gnl|bosTau2|chr25 (29172567-29173032)
               

               
               10-459, gnl|Hg17|chr7 (72907442-72906922)
               

               
               10-459, gnl|Mm7|chr5 (133692993-133693533)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               10-459, gnl|bosTau2|chr25 (29172567-29173032)
               

               
               10-459, gnl|Hg17|chr7 (72907442-72906922)
               

               
               10-459, gnl|Mm7|chr5 (133692993-133693533)

	10-459, gnl\|bosTau2\|chr25 (29172567-29173032)
	10-459, gnl\|Hg17\|chr7 (72907442-72906922)
	10-459, gnl\|Mm7\|chr5 (133692993-133693533)