Non-Coding RNA Search

Pig2-118N13

Sequence:


               
               GATCCAGACCCTGGAGCCAGACAACTGGATGAAGGAGGTGATGCTGTTCGGTCACGGCAC
CCGGAGGCGCATCCGCCTGGGCGAGCTGGAGCTGCTGGAGGAGGTTTTGGCCATGGGGCT
ACGCACAGATGTGGGGCTCACTCACCAGCACTGGCAGCAGTTTGAGCACCAGCTGACCCT
GTGGGATGTATTTGGAGCCAGTGAGGAGGTGAAGGTGCTGCTGGAGCAATGCCTTTTGCT
GCTGGATCACAGGGGTCTTCGGTGTTCCTGGGAGGGGCTGGCCGTGCTGGATTCTCTGTT
GCCCATCCTTCTCTCTCGGCTCCAAGAGGCCTGGCAGCAGAGACCCTCCTCCCCTGTGCC
AGGAGGATAACCTCACGTTCCTGTATCCCAGGACCCTGCCAGGCGGGCTCTGGGGGCTGG
GCTGACACTGCAGTCTTCTCCCCTGGCTCTGGTCACTGCTCAGCCCTGCATCCCCAGGGG
AATGGCTCCAGTAGCGGGGGACATCCTTGTCTGGGAACTAACATTAAATGCACCCACCCC
TGCCAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GATCCAGACCCTGGAGCCAGACAACTGGATGAAGGAGGTGATGCTGTTCGGTCACGGCAC
CCGGAGGCGCATCCGCCTGGGCGAGCTGGAGCTGCTGGAGGAGGTTTTGGCCATGGGGCT
ACGCACAGATGTGGGGCTCACTCACCAGCACTGGCAGCAGTTTGAGCACCAGCTGACCCT
GTGGGATGTATTTGGAGCCAGTGAGGAGGTGAAGGTGCTGCTGGAGCAATGCCTTTTGCT
GCTGGATCACAGGGGTCTTCGGTGTTCCTGGGAGGGGCTGGCCGTGCTGGATTCTCTGTT
GCCCATCCTTCTCTCTCGGCTCCAAGAGGCCTGGCAGCAGAGACCCTCCTCCCCTGTGCC
AGGAGGATAACCTCACGTTCCTGTATCCCAGGACCCTGCCAGGCGGGCTCTGGGGGCTGG
GCTGACACTGCAGTCTTCTCCCCTGGCTCTGGTCACTGCTCAGCCCTGCATCCCCAGGGG
AATGGCTCCAGTAGCGGGGGACATCCTTGTCTGGGAACTAACATTAAATGCACCCACCCC
TGCCAAAAAAAAAAAAAAA

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               250-426, + strand, RNAz p=0.619409

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               250-426, + strand, RNAz p=0.619409

Homologous human UTR: 1 entry(ies)

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Homologous human UTR: 1 entry(ies)

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               3' of NM_018346, +

Homologous human UTR: 1 entry(ies)

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Human gene identifier and UTR site,
human gene reading direction


               
               3' of NM_018346, +

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               250-492, gnl|bosTau2|chr19 (28948746-28948479)
               

               
               250-492, gnl|Hg17|chr17 (45917101-45917369)
               

               
               250-492, gnl|Mm7|chr11 (94651689-94651430)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               250-492, gnl|bosTau2|chr19 (28948746-28948479)
               

               
               250-492, gnl|Hg17|chr17 (45917101-45917369)
               

               
               250-492, gnl|Mm7|chr11 (94651689-94651430)

	250-492, gnl\|bosTau2\|chr19 (28948746-28948479)
	250-492, gnl\|Hg17\|chr17 (45917101-45917369)
	250-492, gnl\|Mm7\|chr11 (94651689-94651430)