Non-Coding RNA Search

Pig2-119A14

Sequence:


               
               CTCCTCCTCGTCCTCCTCCACTGTCTTCCAGCTCTGCAGGGACAGTTCAGAGTATAGGAC
CAGGGCACCCCATCCGGGCACTGGTGGGGGACGAAGTGGAATTGCCATGTCGCATCTCGC
CTGGGAAAGATGGTACAGGCATGGGGGTGGGATGGTACCGGCCCCCCTTCTCCGGGTGGG
TCATCTCTACCGAAATGGCAAGGACCAATATGAAGAGCAGGCGCCTGAATACCGGGGCCG
GACAGAGCTGCTGAAAGAGCTATCGGGGAGGGGAAGGTGACCCTCAGGATCCGGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTCCTCCTCGTCCTCCTCCACTGTCTTCCAGCTCTGCAGGGACAGTTCAGAGTATAGGAC
CAGGGCACCCCATCCGGGCACTGGTGGGGGACGAAGTGGAATTGCCATGTCGCATCTCGC
CTGGGAAAGATGGTACAGGCATGGGGGTGGGATGGTACCGGCCCCCCTTCTCCGGGTGGG
TCATCTCTACCGAAATGGCAAGGACCAATATGAAGAGCAGGCGCCTGAATACCGGGGCCG
GACAGAGCTGCTGAAAGAGCTATCGGGGAGGGGAAGGTGACCCTCAGGATCCGGC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               Q9NU65_HUMAN

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q9NU65_HUMAN

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               78-196, - strand, RNAz p=0.602323

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               78-196, - strand, RNAz p=0.602323

Aligned organism(s): 15 entry(ies)

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Aligned organism(s): 15 entry(ies)

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               40-294, gnl|bosTau2|chr23 (24035867-24035610)
               

               
               40-294, gnl|canFam2|chr35 (29276408-29276802)
               

               
               40-294, gnl|dasNov1|scaffold_107656 (2064-1670)
               

               
               40-294, gnl|echTel1|scaffold_301512 (3126-2735)
               

               
               40-294, gnl|galGal2|chr28 (745272-744874)
               

               
               40-294, gnl|hg17|chr6 (29735040-29735434)
               

               
               40-294, gnl|Hg17|chr6 (29735074-29735331)
               

               
               40-294, gnl|loxAfr1|scaffold_15223 (39217-39609)
               

               
               40-294, gnl|mm7|chr17 (35172305-35171906)
               

               
               40-294, gnl|Mm7|chr17 (35172259-35172002)
               

               
               40-294, gnl|monDom2|scaffold_42 (19250752-19250363)
               

               
               40-294, gnl|oryCun1|scaffold_213232 (263294-262902)
               

               
               40-294, gnl|panTro1|chr5 (30246234-30246628)
               

               
               40-294, gnl|rheMac2|chr4 (29396487-29396881)
               

               
               40-294, gnl|rn3|chr20 (1603618-1604019)

Aligned organism(s): 15 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               40-294, gnl|bosTau2|chr23 (24035867-24035610)
               

               
               40-294, gnl|canFam2|chr35 (29276408-29276802)
               

               
               40-294, gnl|dasNov1|scaffold_107656 (2064-1670)
               

               
               40-294, gnl|echTel1|scaffold_301512 (3126-2735)
               

               
               40-294, gnl|galGal2|chr28 (745272-744874)
               

               
               40-294, gnl|hg17|chr6 (29735040-29735434)
               

               
               40-294, gnl|Hg17|chr6 (29735074-29735331)
               

               
               40-294, gnl|loxAfr1|scaffold_15223 (39217-39609)
               

               
               40-294, gnl|mm7|chr17 (35172305-35171906)
               

               
               40-294, gnl|Mm7|chr17 (35172259-35172002)
               

               
               40-294, gnl|monDom2|scaffold_42 (19250752-19250363)
               

               
               40-294, gnl|oryCun1|scaffold_213232 (263294-262902)
               

               
               40-294, gnl|panTro1|chr5 (30246234-30246628)
               

               
               40-294, gnl|rheMac2|chr4 (29396487-29396881)
               

               
               40-294, gnl|rn3|chr20 (1603618-1604019)

	40-294, gnl\|bosTau2\|chr23 (24035867-24035610)
	40-294, gnl\|canFam2\|chr35 (29276408-29276802)
	40-294, gnl\|dasNov1\|scaffold_107656 (2064-1670)
	40-294, gnl\|echTel1\|scaffold_301512 (3126-2735)
	40-294, gnl\|galGal2\|chr28 (745272-744874)
	40-294, gnl\|hg17\|chr6 (29735040-29735434)
	40-294, gnl\|Hg17\|chr6 (29735074-29735331)
	40-294, gnl\|loxAfr1\|scaffold_15223 (39217-39609)
	40-294, gnl\|mm7\|chr17 (35172305-35171906)
	40-294, gnl\|Mm7\|chr17 (35172259-35172002)
	40-294, gnl\|monDom2\|scaffold_42 (19250752-19250363)
	40-294, gnl\|oryCun1\|scaffold_213232 (263294-262902)
	40-294, gnl\|panTro1\|chr5 (30246234-30246628)
	40-294, gnl\|rheMac2\|chr4 (29396487-29396881)
	40-294, gnl\|rn3\|chr20 (1603618-1604019)