Non-Coding RNA Search

Pig2-119C09

Sequence:


               
               TAGAGAGTCTGGTGCTACAGGTGTGTCTTTGGCTGGCTACCAACAGCCACACCAACACCA
GGCTGGAGCCACGTTCTGTGCACAGAAGGCCCTGATTTCTCATCCACTTATGGCCTCAGA
GATACTGGTCCTGCTTCTGCCCAGCCTCTCCTCTCTGGTCTTGATGCCCCCGTCCTTTCT
GGATTCAAGGCAATGTTGCCTCAAAACAAGGACCAGGTGCTGCTACAGAAAGCAGCATCG
CCTGGGCACCCCCCTCAGCGCCCCTCACAGCTTGTGGACTCTCTTCCCTGCAACCTCCAA
CCTCAGCCTCCCCAGCGATCCCTCCGTCCCGGCCACCCACCCTGCTCCCCTCCCCTGCGG
TCCCACTCGGACTGGCTCCCACTTCTACTCTTCTGACTCAAATTCTGACTCTGTCCTACA
CCCCTATTCTTGCTCTCTCCCAAGTTCCCCCACTTTCTTTCATCAGAATTACCCGTCTCT
CTCCCTGCCTTGTTCTTCCTCGCCCTCCCGCCTATACCCCTCTCCTACTCTCACTCACTC
CTCCTCTCCCTCTCAGCCCCCCAACTCTCTCCCTGGCTCACACTGCCGGTCTCCTTCCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TAGAGAGTCTGGTGCTACAGGTGTGTCTTTGGCTGGCTACCAACAGCCACACCAACACCA
GGCTGGAGCCACGTTCTGTGCACAGAAGGCCCTGATTTCTCATCCACTTATGGCCTCAGA
GATACTGGTCCTGCTTCTGCCCAGCCTCTCCTCTCTGGTCTTGATGCCCCCGTCCTTTCT
GGATTCAAGGCAATGTTGCCTCAAAACAAGGACCAGGTGCTGCTACAGAAAGCAGCATCG
CCTGGGCACCCCCCTCAGCGCCCCTCACAGCTTGTGGACTCTCTTCCCTGCAACCTCCAA
CCTCAGCCTCCCCAGCGATCCCTCCGTCCCGGCCACCCACCCTGCTCCCCTCCCCTGCGG
TCCCACTCGGACTGGCTCCCACTTCTACTCTTCTGACTCAAATTCTGACTCTGTCCTACA
CCCCTATTCTTGCTCTCTCCCAAGTTCCCCCACTTTCTTTCATCAGAATTACCCGTCTCT
CTCCCTGCCTTGTTCTTCCTCGCCCTCCCGCCTATACCCCTCTCCTACTCTCACTCACTC
CTCCTCTCCCTCTCAGCCCCCCAACTCTCTCCCTGGCTCACACTGCCGGTCTCCTTCCC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               136-289, - strand, RNAz p=0.889443

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               136-289, - strand, RNAz p=0.889443

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               20-599, gnl|bosTau2|chr11 (52308702-52308120)
               

               
               20-599, gnl|Hg17|chr2 (27273024-27272407)
               

               
               20-599, gnl|Mm7|chr14 (95611584-95610972)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               20-599, gnl|bosTau2|chr11 (52308702-52308120)
               

               
               20-599, gnl|Hg17|chr2 (27273024-27272407)
               

               
               20-599, gnl|Mm7|chr14 (95611584-95610972)

	20-599, gnl\|bosTau2\|chr11 (52308702-52308120)
	20-599, gnl\|Hg17\|chr2 (27273024-27272407)
	20-599, gnl\|Mm7\|chr14 (95611584-95610972)