Non-Coding RNA Search

Pig2-119G08

Sequence:


               
               TAAATTTTATATAATTTTGCTGTTATACTATAAACATTTACAATGTGTAAAATAAACAGC
CATTAGTGTTTTATTCGTTTTAAATTTATAATTGTTTTAGTAACATTGGATCCAAATATA
TATTATTCATTTAGTGCTTTAATATCTGTTATATGTTAAATTTATGTATTTTTTAATAGG
CGGGAAGGACAGACGAAGTGGCCTCATTCTGACAATTCCATTATGCCTGGAACAGACAAA
TATGGATGAGCTAAGTGTCACCTTAGACTACCTACTCAGCATTCCAAGGTGACTCTTACA
GGTGTCTTCTTAAATTTCAATATGCTGTCATTTACTTACTAATGATTCCTGCTCTTGTTA
GAGTATGCTTTCCAACCTTACCTGCTTTTGTTAGCAGTGAAATTATAATTGAAAACACTA
GAATCAGTAATTTCTGATGCCACAGCAAATAAAGACATTTTACATTCCTGATGCACTGAA
TGATACAGATTTACA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TAAATTTTATATAATTTTGCTGTTATACTATAAACATTTACAATGTGTAAAATAAACAGC
CATTAGTGTTTTATTCGTTTTAAATTTATAATTGTTTTAGTAACATTGGATCCAAATATA
TATTATTCATTTAGTGCTTTAATATCTGTTATATGTTAAATTTATGTATTTTTTAATAGG
CGGGAAGGACAGACGAAGTGGCCTCATTCTGACAATTCCATTATGCCTGGAACAGACAAA
TATGGATGAGCTAAGTGTCACCTTAGACTACCTACTCAGCATTCCAAGGTGACTCTTACA
GGTGTCTTCTTAAATTTCAATATGCTGTCATTTACTTACTAATGATTCCTGCTCTTGTTA
GAGTATGCTTTCCAACCTTACCTGCTTTTGTTAGCAGTGAAATTATAATTGAAAACACTA
GAATCAGTAATTTCTGATGCCACAGCAAATAAAGACATTTTACATTCCTGATGCACTGAA
TGATACAGATTTACA

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               189-346, - strand, RNAz p=0.990988

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               189-346, - strand, RNAz p=0.990988

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-492, gnl|bosTau2|chr2 (8620347-8620852)
               

               
               1-492, gnl|Hg17|chr2 (179873603-179873103)
               

               
               1-492, gnl|Mm7|chr2 (77085601-77085152)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-492, gnl|bosTau2|chr2 (8620347-8620852)
               

               
               1-492, gnl|Hg17|chr2 (179873603-179873103)
               

               
               1-492, gnl|Mm7|chr2 (77085601-77085152)

	1-492, gnl\|bosTau2\|chr2 (8620347-8620852)
	1-492, gnl\|Hg17\|chr2 (179873603-179873103)
	1-492, gnl\|Mm7\|chr2 (77085601-77085152)