Non-Coding RNA Search

Pig2-119I08

Sequence:


               
               GAAATACAGAACTTTTAAACAAAAAAGTTGTGAACACTGGTTTTTTGGTAGTTGTGTTTT
TACTTTTCATTGACATGAATTTAGGAGAGAATCATGGTGCTTTTATTAAATGGACTTCAG
AGTATATGTAAATATGTTTTTAAAAGTTACATCGTTAACAGTAGTAAACTAGTATTTTCG
TTATTGGTATAGGACTTCATGTTTATTGTACAGTATCCAAGGTAAAATGTGTTTGTTTTG
TAAAAACTACTGTAGATTTTTACTTACAAGTGCCTTTTTGCCACCTAATGTTTTTATTTA
TAGGAATGCTGATCTTTTGTACATACTATTTGTTTTAAAATCATGTTTAATAAATGTTTG
TATATAAATGCATATGTACAGAAGCTATTTCAAAAGGAAATCAAAATTGCTAGTAAAAAT
GTTTGAGGTTGCATTAAGCACTGATATGCATCTAGACTTTAGATGATTTTGTTGTTTGTT
TCTGTGTGATGTGGGAAGCTGTTGGTCATTGAATTCATTGAATTATGTCAAAATACTTCC
CCAAAGATTTAATTTTAAATCACTTCTGATAGAGTAATTTTATTTTTAATGTCATATGGC
TTCATATTCATATTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAAATACAGAACTTTTAAACAAAAAAGTTGTGAACACTGGTTTTTTGGTAGTTGTGTTTT
TACTTTTCATTGACATGAATTTAGGAGAGAATCATGGTGCTTTTATTAAATGGACTTCAG
AGTATATGTAAATATGTTTTTAAAAGTTACATCGTTAACAGTAGTAAACTAGTATTTTCG
TTATTGGTATAGGACTTCATGTTTATTGTACAGTATCCAAGGTAAAATGTGTTTGTTTTG
TAAAAACTACTGTAGATTTTTACTTACAAGTGCCTTTTTGCCACCTAATGTTTTTATTTA
TAGGAATGCTGATCTTTTGTACATACTATTTGTTTTAAAATCATGTTTAATAAATGTTTG
TATATAAATGCATATGTACAGAAGCTATTTCAAAAGGAAATCAAAATTGCTAGTAAAAAT
GTTTGAGGTTGCATTAAGCACTGATATGCATCTAGACTTTAGATGATTTTGTTGTTTGTT
TCTGTGTGATGTGGGAAGCTGTTGGTCATTGAATTCATTGAATTATGTCAAAATACTTCC
CCAAAGATTTAATTTTAAATCACTTCTGATAGAGTAATTTTATTTTTAATGTCATATGGC
TTCATATTCATATTTT

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               230-347, + strand, RNAz p=0.556617

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               230-347, + strand, RNAz p=0.556617

Homologous human UTR: 1 entry(ies)

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Homologous human UTR: 1 entry(ies)

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               5' of BX647586, +

Homologous human UTR: 1 entry(ies)

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Human gene identifier and UTR site,
human gene reading direction


               
               5' of BX647586, +

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-616, gnl|bosTau2|chr15 (3682954-3683569)
               

               
               1-616, gnl|Hg17|chr11 (95143969-95143346)
               

               
               1-616, gnl|Mm7|chr9 (13681668-13682288)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-616, gnl|bosTau2|chr15 (3682954-3683569)
               

               
               1-616, gnl|Hg17|chr11 (95143969-95143346)
               

               
               1-616, gnl|Mm7|chr9 (13681668-13682288)

	1-616, gnl\|bosTau2\|chr15 (3682954-3683569)
	1-616, gnl\|Hg17\|chr11 (95143969-95143346)
	1-616, gnl\|Mm7\|chr9 (13681668-13682288)