Non-Coding RNA Search

Pig2-121A18

Sequence:


               
               TCAGCTGCCCCCCACTTTCCTCCAGGATAAACAAGGGGCGTCTCCTGCCTCGCATGCTCA
AGGCCAGGGTCCAGGCCTACAGTCACCCAGTTTAGAGCCACAGTTCCCCGCACGGCCGCG
CCATGATGCAGGGGTCACTCAGGAGCCCCTGAGAGATTCAGGCAGTCACCTGGGAAATAC
CTGGAGCCACGAGAGCGACGTGCCAAGCCTGCAATCATCCAGCCTAGAGCAAAGCAGTGA
TGTTAGCCGACTGAGCAGCGGGTACGCAGGAGATGAGGAGAGCAGTGAGGTCAGCTTGCT
GGGCAGTGGTCGACACGTGCGTTTGAATAGAAGGCTCCACACCCAGGCAGGTGGCGCCCC
GACCGGTCAGGTGTGCGCCACCTACTCCCCCAGGCAGGTGAAGAGCCGGCTGGCCAGCCG
AGCCGACAGCGCTGTGCAGACTGGAGGGGAAAAGTGAGACCAACCTGCCCGGTGGCAGCA
TGGACAGCCGGGCCAGCAGCTTGACCAGCCTCAGTTTCATCAGCCTGGGCAGCAGCGCCC
TAAACTACCAGGTGAGCAGCGGGCCGGTCAGTTCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCAGCTGCCCCCCACTTTCCTCCAGGATAAACAAGGGGCGTCTCCTGCCTCGCATGCTCA
AGGCCAGGGTCCAGGCCTACAGTCACCCAGTTTAGAGCCACAGTTCCCCGCACGGCCGCG
CCATGATGCAGGGGTCACTCAGGAGCCCCTGAGAGATTCAGGCAGTCACCTGGGAAATAC
CTGGAGCCACGAGAGCGACGTGCCAAGCCTGCAATCATCCAGCCTAGAGCAAAGCAGTGA
TGTTAGCCGACTGAGCAGCGGGTACGCAGGAGATGAGGAGAGCAGTGAGGTCAGCTTGCT
GGGCAGTGGTCGACACGTGCGTTTGAATAGAAGGCTCCACACCCAGGCAGGTGGCGCCCC
GACCGGTCAGGTGTGCGCCACCTACTCCCCCAGGCAGGTGAAGAGCCGGCTGGCCAGCCG
AGCCGACAGCGCTGTGCAGACTGGAGGGGAAAAGTGAGACCAACCTGCCCGGTGGCAGCA
TGGACAGCCGGGCCAGCAGCTTGACCAGCCTCAGTTTCATCAGCCTGGGCAGCAGCGCCC
TAAACTACCAGGTGAGCAGCGGGCCGGTCAGTTCC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               455-574, - strand, RNAz p=0.658096

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               455-574, - strand, RNAz p=0.658096

Predicted microRNA(s): 1 entry(ies)

More info

Predicted microRNA(s): 1 entry(ies)

Help | Less info


               
               329-460, - strand, RNAmicro p=0.95222

Predicted microRNA(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro


               
               329-460, - strand, RNAmicro p=0.95222

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               1-574, gnl|bosTau2|chr25 (21262780-21263356)
               

               
               1-574, gnl|Hg17|chr16 (26985832-26986393)
               

               
               1-574, gnl|Mm7|chr7 (121465594-121466143)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-574, gnl|bosTau2|chr25 (21262780-21263356)
               

               
               1-574, gnl|Hg17|chr16 (26985832-26986393)
               

               
               1-574, gnl|Mm7|chr7 (121465594-121466143)

	1-574, gnl\|bosTau2\|chr25 (21262780-21263356)
	1-574, gnl\|Hg17\|chr16 (26985832-26986393)
	1-574, gnl\|Mm7\|chr7 (121465594-121466143)