Non-Coding RNA Search

Pig2-121B01

Sequence:


               
               GTAGAGAATGACGTGGTCAGACAACGGACCTGCTGACAGTCGGAGTCTGACATGCCCCAG
TAGAAGCAGCAGAAAGGGAACAACACTGACCTTTGGGAGAGTGACAGGATGAGGGCAAAG
TGCCCTCACCCCCCCCCCCACTGGTTGCTGCTGGAGTGGTGCTGATGCTGGAAAGAGGCC
TGTCTGGCCCTGAGGGAGACCCCTTTCTGAAGCTGTGGTGCTTGGACAACCTGCTCTCCA
CATTGCCGGGCACCTGTAGGTGTCCCTCGAGAGCTCAGTTTTGAGGTTCAAGCCAGTGTG
GCCATGAAGGGGCTGCCTATTGGGCTGATGCTGTGACCCTGGAGTCTGCCTTTCCTGCCA
GTCCCCCTGCCCGGAACATGTGGCTGCGGGTTGGCCCGCCCTCTCTGTCCCTGAGCCCCA
AGCCCACAGTTGGCCGGAGCCTGTGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTAGAGAATGACGTGGTCAGACAACGGACCTGCTGACAGTCGGAGTCTGACATGCCCCAG
TAGAAGCAGCAGAAAGGGAACAACACTGACCTTTGGGAGAGTGACAGGATGAGGGCAAAG
TGCCCTCACCCCCCCCCCCACTGGTTGCTGCTGGAGTGGTGCTGATGCTGGAAAGAGGCC
TGTCTGGCCCTGAGGGAGACCCCTTTCTGAAGCTGTGGTGCTTGGACAACCTGCTCTCCA
CATTGCCGGGCACCTGTAGGTGTCCCTCGAGAGCTCAGTTTTGAGGTTCAAGCCAGTGTG
GCCATGAAGGGGCTGCCTATTGGGCTGATGCTGTGACCCTGGAGTCTGCCTTTCCTGCCA
GTCCCCCTGCCCGGAACATGTGGCTGCGGGTTGGCCCGCCCTCTCTGTCCCTGAGCCCCA
AGCCCACAGTTGGCCGGAGCCTGTGC

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               176-334, + strand, RNAz p=0.896184

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               176-334, + strand, RNAz p=0.896184

Homologous human UTR: 1 entry(ies)

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Homologous human UTR: 1 entry(ies)

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               5' of NM_018977, +

Homologous human UTR: 1 entry(ies)

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Human gene identifier and UTR site,
human gene reading direction


               
               5' of NM_018977, +

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               176-446, gnl|bosTau2|chrX (21935310-21935580)
               

               
               176-446, gnl|Hg17|chrX (70150419-70150689)
               

               
               176-446, gnl|Mm7|chrX (96629138-96629398)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               176-446, gnl|bosTau2|chrX (21935310-21935580)
               

               
               176-446, gnl|Hg17|chrX (70150419-70150689)
               

               
               176-446, gnl|Mm7|chrX (96629138-96629398)

	176-446, gnl\|bosTau2\|chrX (21935310-21935580)
	176-446, gnl\|Hg17\|chrX (70150419-70150689)
	176-446, gnl\|Mm7\|chrX (96629138-96629398)