Pig2-122B19
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TGCGCCCGTGGGACCGGTGAAGTTCTGGCGACCCGGTACAGAGGGACCGGGTGTCAGCAT CTCTGAAGAGAGACAGAGTCTAGCTGAAAACTCTGCAACAACTGTTGTTTACAATCCTTA TGCTGCCCTTTCTATAGAGCAGCAGAGGCAGAAGCTGCCCGTGTTCAAGCTTAGGAATCA TATATTATACTTGATAGAAAACTATCAGACAGTGGTGATTGTTGGAGAAACAGGATGTGG AAAGAGCACGCAGATTCCACAATACCTTGCAGAAGCTGGCTGGACAGCCGAAGGAAGAGT GGTGGGAGTGACCCAGCCTCGAAGAGTGGCTGCCGTTACAGTTGCAGGGAGAGTAGCCGA GGAAAGGGGTGCGGTGCTGGGCCACGAGGTGGGCTACTGCATCCGCTTTGACGACTGCAC TGACCCGCTGGCGACGAGAATTAAGTTTCTGACCGATGGAATGCTGGTCCGGGAAATGAT GGTTGATCCATTGTTAACAAAATATAGTGCCATCATGCTGGATGAAGCCCATG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TGCGCCCGTGGGACCGGTGAAGTTCTGGCGACCCGGTACAGAGGGACCGGGTGTCAGCAT CTCTGAAGAGAGACAGAGTCTAGCTGAAAACTCTGCAACAACTGTTGTTTACAATCCTTA TGCTGCCCTTTCTATAGAGCAGCAGAGGCAGAAGCTGCCCGTGTTCAAGCTTAGGAATCA TATATTATACTTGATAGAAAACTATCAGACAGTGGTGATTGTTGGAGAAACAGGATGTGG AAAGAGCACGCAGATTCCACAATACCTTGCAGAAGCTGGCTGGACAGCCGAAGGAAGAGT GGTGGGAGTGACCCAGCCTCGAAGAGTGGCTGCCGTTACAGTTGCAGGGAGAGTAGCCGA GGAAAGGGGTGCGGTGCTGGGCCACGAGGTGGGCTACTGCATCCGCTTTGACGACTGCAC TGACCCGCTGGCGACGAGAATTAAGTTTCTGACCGATGGAATGCTGGTCCGGGAAATGAT GGTTGATCCATTGTTAACAAAATATAGTGCCATCATGCTGGATGAAGCCCATG |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 4 entry(ies) | More info |
| Predicted RNA structure(s): 4 entry(ies) | Help | Less info |
| 35-169, + strand, RNAz p=0.933799 | |
| 35-169, - strand, RNAz p=0.933799 | |
| 35-169, + strand, RNAz p=0.849554 | |
| 35-169, - strand, RNAz p=0.849554 |
| Predicted RNA structure(s): 4 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 35-169, + strand, RNAz p=0.933799 | |
| 35-169, - strand, RNAz p=0.933799 | |
| 35-169, + strand, RNAz p=0.849554 | |
| 35-169, - strand, RNAz p=0.849554 |
| Homologous human UTR: 1 entry(ies) | More info |
| Homologous human UTR: 1 entry(ies) | Help | Less info |
Human gene identifier and UTR site,
human gene reading direction
human gene reading direction
| 5' of BC033453, + |
| Aligned organism(s): 32 entry(ies) | More info |
| Aligned organism(s): 32 entry(ies) | Help | Less info |
| 35-169, gnl|bosTau2|chr20 (23215403-23215537) | |
| 35-169, gnl|canFam2|chr24 (30305089-30305235) | |
| 35-169, gnl|dasNov1|scaffold_53148 (9354-9208) | |
| 35-169, gnl|echTel1|scaffold_308366 (48113-48259) | |
| 35-169, gnl|fr1|chrUn (147153083-147152943) | |
| 35-169, gnl|hg17|chr20 (37031128-37031274) | |
| 35-169, gnl|Hg17|chr20 (37031137-37031271) | |
| 35-169, gnl|mm7|chr2 (158542255-158542401) | |
| 35-169, gnl|Mm7|chr2 (158542264-158542398) | |
| 35-169, gnl|monDom2|scaffold_6 (3403493-3403639) | |
| 35-169, gnl|oryCun1|scaffold_188888 (2185-2039) | |
| 35-169, gnl|panTro1|chr21 (39412824-39412970) | |
| 35-169, gnl|rheMac2|chr10 (25475767-25475621) | |
| 35-169, gnl|rn3|chr3 (149445093-149445239) | |
| 35-169, gnl|tetNig1|chr9 (5437274-5437414) | |
| 341-445, gnl|bosTau2|chr20 (23234169-23234273) | |
| 341-445, gnl|canFam2|chr24 (30322459-30322590) | |
| 341-445, gnl|dasNov1|scaffold_2076 (49152-49021) | |
| 341-445, gnl|echTel1|scaffold_310112 (46317-46186) | |
| 341-445, gnl|fr1|chrUn (147152453-147152344) | |
| 341-445, gnl|galGal2|chr20 (3650295-3650415) | |
| 341-445, gnl|hg17|chr20 (37050847-37050978) | |
| 341-445, gnl|Hg17|chr20 (37050870-37050974) | |
| 341-445, gnl|loxAfr1|scaffold_47606 (13880-13749) | |
| 341-445, gnl|mm7|chr2 (158556297-158556428) | |
| 341-445, gnl|Mm7|chr2 (158556320-158556424) | |
| 341-445, gnl|monDom2|scaffold_6 (3420048-3420168) | |
| 341-445, gnl|oryCun1|scaffold_214075 (55813-55682) | |
| 341-445, gnl|panTro1|chr21 (39432710-39432841) | |
| 341-445, gnl|rheMac2|chr10 (25455956-25455825) | |
| 341-445, gnl|rn3|chr3 (149455423-149455554) | |
| 341-445, gnl|tetNig1|chr9 (5437850-5437986) |
| Aligned organism(s): 32 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 35-169, gnl|bosTau2|chr20 (23215403-23215537) | |
| 35-169, gnl|canFam2|chr24 (30305089-30305235) | |
| 35-169, gnl|dasNov1|scaffold_53148 (9354-9208) | |
| 35-169, gnl|echTel1|scaffold_308366 (48113-48259) | |
| 35-169, gnl|fr1|chrUn (147153083-147152943) | |
| 35-169, gnl|hg17|chr20 (37031128-37031274) | |
| 35-169, gnl|Hg17|chr20 (37031137-37031271) | |
| 35-169, gnl|mm7|chr2 (158542255-158542401) | |
| 35-169, gnl|Mm7|chr2 (158542264-158542398) | |
| 35-169, gnl|monDom2|scaffold_6 (3403493-3403639) | |
| 35-169, gnl|oryCun1|scaffold_188888 (2185-2039) | |
| 35-169, gnl|panTro1|chr21 (39412824-39412970) | |
| 35-169, gnl|rheMac2|chr10 (25475767-25475621) | |
| 35-169, gnl|rn3|chr3 (149445093-149445239) | |
| 35-169, gnl|tetNig1|chr9 (5437274-5437414) | |
| 341-445, gnl|bosTau2|chr20 (23234169-23234273) | |
| 341-445, gnl|canFam2|chr24 (30322459-30322590) | |
| 341-445, gnl|dasNov1|scaffold_2076 (49152-49021) | |
| 341-445, gnl|echTel1|scaffold_310112 (46317-46186) | |
| 341-445, gnl|fr1|chrUn (147152453-147152344) | |
| 341-445, gnl|galGal2|chr20 (3650295-3650415) | |
| 341-445, gnl|hg17|chr20 (37050847-37050978) | |
| 341-445, gnl|Hg17|chr20 (37050870-37050974) | |
| 341-445, gnl|loxAfr1|scaffold_47606 (13880-13749) | |
| 341-445, gnl|mm7|chr2 (158556297-158556428) | |
| 341-445, gnl|Mm7|chr2 (158556320-158556424) | |
| 341-445, gnl|monDom2|scaffold_6 (3420048-3420168) | |
| 341-445, gnl|oryCun1|scaffold_214075 (55813-55682) | |
| 341-445, gnl|panTro1|chr21 (39432710-39432841) | |
| 341-445, gnl|rheMac2|chr10 (25455956-25455825) | |
| 341-445, gnl|rn3|chr3 (149455423-149455554) | |
| 341-445, gnl|tetNig1|chr9 (5437850-5437986) |