Non-Coding RNA Search

Pig2-122L06

Sequence:


               
               GGGGAGACCGGGAACTGGCGCTCCGAGCAATGTAGCAGCCGAGAAGGAGAAGGGGATGAG
GCACCGTCGCTGCGCTGACAGCCAGCCACCAGAAATACACTGTGGCGAAATGCTTCCACC
TTCTTGCCAAAATGAACAGTGAGGAAAAATGAAGAACCCTGAAGAACTCCAAAGAAAAGT
TGTAGAGCAGGAATAGCCACCCTCCTCTGGAGTCTGATTCATCCACAGCCATCATAAAAA
AGGTATTTGCATCATGTTTGGAAAGAAAAAGAAAAAGATTGAAATATCCGGCCCATCCAA
CTTTGAACACAGGGTTCATACTGGGTTTGATCCGCAAGAACAGAAATTCACTGGCCTCCC
CCAACAGTGGCACAGCCTGTTAGCGGACACAGCCAACAGGCCCAAGCCCATGGTAGACCC
TTCGTGCATCACACCCATCCAGCTGGCTCCCATGAAGGTATGGCGAGGACGCTGTCTTTA
CCTTGGCTTAAGAAGTGTGCTCCCATTTGATGCAGGGCCCCTTCTTTATGGGCGTGCTAT
CAAATGCCTAAATCACATGTGTGTTTTTTAAATAGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGGGAGACCGGGAACTGGCGCTCCGAGCAATGTAGCAGCCGAGAAGGAGAAGGGGATGAG
GCACCGTCGCTGCGCTGACAGCCAGCCACCAGAAATACACTGTGGCGAAATGCTTCCACC
TTCTTGCCAAAATGAACAGTGAGGAAAAATGAAGAACCCTGAAGAACTCCAAAGAAAAGT
TGTAGAGCAGGAATAGCCACCCTCCTCTGGAGTCTGATTCATCCACAGCCATCATAAAAA
AGGTATTTGCATCATGTTTGGAAAGAAAAAGAAAAAGATTGAAATATCCGGCCCATCCAA
CTTTGAACACAGGGTTCATACTGGGTTTGATCCGCAAGAACAGAAATTCACTGGCCTCCC
CCAACAGTGGCACAGCCTGTTAGCGGACACAGCCAACAGGCCCAAGCCCATGGTAGACCC
TTCGTGCATCACACCCATCCAGCTGGCTCCCATGAAGGTATGGCGAGGACGCTGTCTTTA
CCTTGGCTTAAGAAGTGTGCTCCCATTTGATGCAGGGCCCCTTCTTTATGGGCGTGCTAT
CAAATGCCTAAATCACATGTGTGTTTTTTAAATAGC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|34859266|ref|XP_345440.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|34859266|ref|XP_345440.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               321-480, - strand, RNAz p=0.983465

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               321-480, - strand, RNAz p=0.983465

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               241-517, gnl|bosTau2|chr13 (600738-600463)
               

               
               241-517, gnl|Hg17|chr20 (9572989-9572698)
               

               
               241-517, gnl|Mm7|chr2 (135915130-135914856)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               241-517, gnl|bosTau2|chr13 (600738-600463)
               

               
               241-517, gnl|Hg17|chr20 (9572989-9572698)
               

               
               241-517, gnl|Mm7|chr2 (135915130-135914856)

	241-517, gnl\|bosTau2\|chr13 (600738-600463)
	241-517, gnl\|Hg17\|chr20 (9572989-9572698)
	241-517, gnl\|Mm7\|chr2 (135915130-135914856)