Non-Coding RNA Search

Pig2-129G04

Sequence:


               
               GCCGCGCCTCGGGAGGAGGTGAGGCTTCGGCATGCACCCAAACCTCTCTTCCGAGGCTTC
AGGGTCGGGAGATGGCTCCTCCGTGGGGATGAGCTAGACAAGCCTAGGAGATACCAGCAG
CCGCTTTCCGCTTGCGCAGGGGACAGTGTTAATCGCTCCCACCGGGTTTGATTTGCACTG
ACTTTGGCCTGCGGTCCAGGATGCTTTGTTCTTGGGACCAGACCTGACCAGAAGTTGACC
TCATGAGCACCTCAACCTCTCCAGCTGCCATGCTCCTCCGGAGGCTGAGGCGGCTCTCCT
GGGGCAGCACTGCTGTCCAGCTCTTCATCTTAACGGTGGTGACATTTGGCCTGCTGGCTC
CTCTGGCCTGTCACCGGCTTCTGCACTCTTACTTCTACTTGCGCCACTGGCATCTGAACC
AAATGAGCCAAGAGTTTCTGCAGCAAAGCTTGAAAGAGGGTGAAGCTGCCCTTCACTACT
TTGAGGAGCTGCCCTCTGCCAACGGCTCAGTGCCCATTGTCTGGCAGGCCACGCCCCGCC
CCTGGCTGGTCATCACCATCATCACTGTGGACAGGCAACCTGGCTTCCACTACGTCTTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCCGCGCCTCGGGAGGAGGTGAGGCTTCGGCATGCACCCAAACCTCTCTTCCGAGGCTTC
AGGGTCGGGAGATGGCTCCTCCGTGGGGATGAGCTAGACAAGCCTAGGAGATACCAGCAG
CCGCTTTCCGCTTGCGCAGGGGACAGTGTTAATCGCTCCCACCGGGTTTGATTTGCACTG
ACTTTGGCCTGCGGTCCAGGATGCTTTGTTCTTGGGACCAGACCTGACCAGAAGTTGACC
TCATGAGCACCTCAACCTCTCCAGCTGCCATGCTCCTCCGGAGGCTGAGGCGGCTCTCCT
GGGGCAGCACTGCTGTCCAGCTCTTCATCTTAACGGTGGTGACATTTGGCCTGCTGGCTC
CTCTGGCCTGTCACCGGCTTCTGCACTCTTACTTCTACTTGCGCCACTGGCATCTGAACC
AAATGAGCCAAGAGTTTCTGCAGCAAAGCTTGAAAGAGGGTGAAGCTGCCCTTCACTACT
TTGAGGAGCTGCCCTCTGCCAACGGCTCAGTGCCCATTGTCTGGCAGGCCACGCCCCGCC
CCTGGCTGGTCATCACCATCATCACTGTGGACAGGCAACCTGGCTTCCACTACGTCTTG

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               245-364, - strand, RNAz p=0.646433

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               245-364, - strand, RNAz p=0.646433

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               165-599, gnl|bosTau2|chr8 (48650455-48650022)
               

               
               165-599, gnl|Hg17|chr9 (101319007-101318573)
               

               
               165-599, gnl|Mm7|chr4 (49601056-49600624)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               165-599, gnl|bosTau2|chr8 (48650455-48650022)
               

               
               165-599, gnl|Hg17|chr9 (101319007-101318573)
               

               
               165-599, gnl|Mm7|chr4 (49601056-49600624)

	165-599, gnl\|bosTau2\|chr8 (48650455-48650022)
	165-599, gnl\|Hg17\|chr9 (101319007-101318573)
	165-599, gnl\|Mm7\|chr4 (49601056-49600624)