Non-Coding RNA Search

Pig2-129L02

Sequence:


               
               GGCTGCCTGTACCAACCAGCCCCACATCGTCAATTACCTGACGGAGAACCCGCACAAGAA
GGCGGACATGCGGCGCCAGGACTCCCGTGGCAACACGGTGCTGCATGCGCTGGTGGCCAT
CGCTGACAACACCCGTGAGAACACTAAGTTTGTCACCAAGATGTACGACCTGCTGCTGCT
CAAGTGTGCCCGCCTCTTCCCTGACAGCAACCTGGAAGCCGTGCTCAACAACGACGGCCT
CTCGCCCCTCATGATGGCTGCCAAGACGGGCAAGATTGGGGTGAGGGCAGGGCTGGGTGG
CACCCATTCTTACTCCTCTACACACACAAACACATTCTTATTAATATGCACACCCACCTC
CCATCCTGCCAACCCTGGTGTGTGGCTGTCACAGCTCAGAAACCTGCTGTGGCTCCCTAT
TGTCTAGCCAAGCTCTATTCACTTTCAACCCAGAGCCTCTCTCCTCACCCCACCCCACCA
GATGCTCACTGCCTGCTCCAACCAGCCAGGGCAAGCCACCGATAGAGAACTGAGTCCCAG
AGCTCCAGCCCTGCAGTCCCCCCTCCCTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGCTGCCTGTACCAACCAGCCCCACATCGTCAATTACCTGACGGAGAACCCGCACAAGAA
GGCGGACATGCGGCGCCAGGACTCCCGTGGCAACACGGTGCTGCATGCGCTGGTGGCCAT
CGCTGACAACACCCGTGAGAACACTAAGTTTGTCACCAAGATGTACGACCTGCTGCTGCT
CAAGTGTGCCCGCCTCTTCCCTGACAGCAACCTGGAAGCCGTGCTCAACAACGACGGCCT
CTCGCCCCTCATGATGGCTGCCAAGACGGGCAAGATTGGGGTGAGGGCAGGGCTGGGTGG
CACCCATTCTTACTCCTCTACACACACAAACACATTCTTATTAATATGCACACCCACCTC
CCATCCTGCCAACCCTGGTGTGTGGCTGTCACAGCTCAGAAACCTGCTGTGGCTCCCTAT
TGTCTAGCCAAGCTCTATTCACTTTCAACCCAGAGCCTCTCTCCTCACCCCACCCCACCA
GATGCTCACTGCCTGCTCCAACCAGCCAGGGCAAGCCACCGATAGAGAACTGAGTCCCAG
AGCTCCAGCCCTGCAGTCCCCCCTCCCTC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               454-569, - strand, RNAz p=0.920944

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               454-569, - strand, RNAz p=0.920944

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-569, gnl|bosTau2|chr17 (35856647-35856060)
               

               
               1-569, gnl|Hg17|chr12 (108699418-108698832)
               

               
               1-569, gnl|Mm7|chr5 (113855628-113855124)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-569, gnl|bosTau2|chr17 (35856647-35856060)
               

               
               1-569, gnl|Hg17|chr12 (108699418-108698832)
               

               
               1-569, gnl|Mm7|chr5 (113855628-113855124)

	1-569, gnl\|bosTau2\|chr17 (35856647-35856060)
	1-569, gnl\|Hg17\|chr12 (108699418-108698832)
	1-569, gnl\|Mm7\|chr5 (113855628-113855124)