Non-Coding RNA Search

Pig2-132B23a

Sequence:


               
               AGTGAGGTGTCATCTTTCCTTCAGTAAGGACAAGGACAGGTCCACACAGGCCCGCTCCTC
CACATTCATTCTGGTATGCACATGCTGTGGTCAGGCATTCAGGAAATCTGACTGTAAAAG
ACACATTTATACACCTTGAAAGAAAGATACTACTCTGTAATGCAAACAGAAACACATGCT
TGTTCAGGTACACACAGAGATACACATCACACGCCTCCTTTCTTATCCAGCCCCAGTCCC
TTTCAGAATTGGAAGATCAAGGGAAGAGATCCAGGTTCAGAAGGGTGAGCTGGTCACTGT
AGGAATGGCCTCCAGGAAGTCTCACAGGGAAGCCACAGGCAGCTCTGGCCTTTTGCCTGG
CCAGAAAAAGAATTGTGGACAAAGACCACTGGCTTACCTTCTAACTGACAGAACGGGGCT
AGGGTCTTGTGTTAGTGTCAAGCTCCCAGCCCCCAGGTGACATCCCTGTACTCCATCCAC
TCCCAGTAAAGAGCAGTGAACTGCAGGCCATCAAGACAGAGCTGACCCAGATCAAGTCCA
ACAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGTGAGGTGTCATCTTTCCTTCAGTAAGGACAAGGACAGGTCCACACAGGCCCGCTCCTC
CACATTCATTCTGGTATGCACATGCTGTGGTCAGGCATTCAGGAAATCTGACTGTAAAAG
ACACATTTATACACCTTGAAAGAAAGATACTACTCTGTAATGCAAACAGAAACACATGCT
TGTTCAGGTACACACAGAGATACACATCACACGCCTCCTTTCTTATCCAGCCCCAGTCCC
TTTCAGAATTGGAAGATCAAGGGAAGAGATCCAGGTTCAGAAGGGTGAGCTGGTCACTGT
AGGAATGGCCTCCAGGAAGTCTCACAGGGAAGCCACAGGCAGCTCTGGCCTTTTGCCTGG
CCAGAAAAAGAATTGTGGACAAAGACCACTGGCTTACCTTCTAACTGACAGAACGGGGCT
AGGGTCTTGTGTTAGTGTCAAGCTCCCAGCCCCCAGGTGACATCCCTGTACTCCATCCAC
TCCCAGTAAAGAGCAGTGAACTGCAGGCCATCAAGACAGAGCTGACCCAGATCAAGTCCA
ACAT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               389-496, - strand, RNAz p=0.759912

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               389-496, - strand, RNAz p=0.759912

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               86-544, gnl|bosTau2|chr13 (47915452-47915007)
               

               
               86-544, gnl|Hg17|chr20 (32127778-32128226)
               

               
               86-544, gnl|Mm7|chr2 (154604053-154604465)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               86-544, gnl|bosTau2|chr13 (47915452-47915007)
               

               
               86-544, gnl|Hg17|chr20 (32127778-32128226)
               

               
               86-544, gnl|Mm7|chr2 (154604053-154604465)

	86-544, gnl\|bosTau2\|chr13 (47915452-47915007)
	86-544, gnl\|Hg17\|chr20 (32127778-32128226)
	86-544, gnl\|Mm7\|chr2 (154604053-154604465)