Pig2-133B15
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GAGCCCTGCCGCCCAGCACAGGGGCCTGGTGCACCAAAGTCACCTCCGAACACCTCAGTG
TCATCCTGGGCAACATTCNTGAAAATCATTAACAACAACCTGGGCATCGACGAGGCCTCC
TGGATGAAGCGCATTGCAGTGTACGCCCAGCCAATCATCAGCAAAGCCAGACCAGACCTG
CTGAGAAGCCACTTCATCCCAACACTGGAGAAGCTAAAGAAGAAGGCTGTCAAGACTGTG
CAGGAAGAGGAGCAGCTGAAAGCCGACAGCAAAGGGGACACTCAGGAGGCAGAGCTCCTC
ATCCTGGACGAGTTTGCCGTCCTCTGGCGGGATCTCTACGCCTTCTACCCCATGCTGATC
CGCTACGTGGACAACAACAGATCTAACTGGCTCAAAAGCCCAGATGCTGACTCTGACCAG
CTCTTCCGCATG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
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GAGCCCTGCCGCCCAGCACAGGGGCCTGGTGCACCAAAGTCACCTCCGAACACCTCAGTG
TCATCCTGGGCAACATTCNTGAAAATCATTAACAACAACCTGGGCATCGACGAGGCCTCC
TGGATGAAGCGCATTGCAGTGTACGCCCAGCCAATCATCAGCAAAGCCAGACCAGACCTG
CTGAGAAGCCACTTCATCCCAACACTGGAGAAGCTAAAGAAGAAGGCTGTCAAGACTGTG
CAGGAAGAGGAGCAGCTGAAAGCCGACAGCAAAGGGGACACTCAGGAGGCAGAGCTCCTC
ATCCTGGACGAGTTTGCCGTCCTCTGGCGGGATCTCTACGCCTTCTACCCCATGCTGATC
CGCTACGTGGACAACAACAGATCTAACTGGCTCAAAAGCCCAGATGCTGACTCTGACCAG
CTCTTCCGCATG
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
137-380, gnl|bosTau2|chr10 (17750237-17749994) |
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137-380, gnl|canFam2|chr30 (4235689-4235425) |
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137-380, gnl|danRer3|chr20 (37076951-37077200) |
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137-380, gnl|dasNov1|scaffold_4772 (94765-94517) |
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137-380, gnl|echTel1|scaffold_264815 (482-218) |
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137-380, gnl|fr1|chrUn (81737398-81737647) |
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137-380, gnl|galGal2|chr5 (27098709-27098451) |
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137-380, gnl|hg17|chr15 (31867697-31867957) |
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137-380, gnl|Hg17|chr15 (31867708-31867951) |
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137-380, gnl|loxAfr1|scaffold_20697 (48737-49001) |
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137-380, gnl|mm7|chr2 (112559568-112559304) |
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137-380, gnl|Mm7|chr2 (112559551-112559308) |
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137-380, gnl|monDom2|scaffold_12 (11589251-11589512) |
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137-380, gnl|oryCun1|scaffold_206441 (107342-107604) |
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137-380, gnl|panTro1|chr16 (31502676-31502936) |
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137-380, gnl|rheMac2|chr7 (12018098-12018358) |
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137-380, gnl|rn3|chr3 (98445760-98445496) |
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137-380, gnl|tetNig1|chr10 (4160771-4161018) |
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137-380, gnl|xenTro1|scaffold_572 (628159-628405) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
137-380, gnl|bosTau2|chr10 (17750237-17749994) |
|
137-380, gnl|canFam2|chr30 (4235689-4235425) |
|
137-380, gnl|danRer3|chr20 (37076951-37077200) |
|
137-380, gnl|dasNov1|scaffold_4772 (94765-94517) |
|
137-380, gnl|echTel1|scaffold_264815 (482-218) |
|
137-380, gnl|fr1|chrUn (81737398-81737647) |
|
137-380, gnl|galGal2|chr5 (27098709-27098451) |
|
137-380, gnl|hg17|chr15 (31867697-31867957) |
|
137-380, gnl|Hg17|chr15 (31867708-31867951) |
|
137-380, gnl|loxAfr1|scaffold_20697 (48737-49001) |
|
137-380, gnl|mm7|chr2 (112559568-112559304) |
|
137-380, gnl|Mm7|chr2 (112559551-112559308) |
|
137-380, gnl|monDom2|scaffold_12 (11589251-11589512) |
|
137-380, gnl|oryCun1|scaffold_206441 (107342-107604) |
|
137-380, gnl|panTro1|chr16 (31502676-31502936) |
|
137-380, gnl|rheMac2|chr7 (12018098-12018358) |
|
137-380, gnl|rn3|chr3 (98445760-98445496) |
|
137-380, gnl|tetNig1|chr10 (4160771-4161018) |
|
137-380, gnl|xenTro1|scaffold_572 (628159-628405) |
