Non-Coding RNA Search

Pig2-133F17

Sequence:


               
               GCCGCGGGGGTTCGCAGCCCCAGCTGCGGGCCATGTGGGAACCTCCCGGAGCTGAAGTGT
TCCCGGCGGCCCTTGGCGGCGTTCTCTTCTTGCTGCTCTTCGCCCTCGGGGTCCGCCAGC
TTTTGAAGCAGAGACGGCCGTCGGGCTTCCCCCCGGGACCGTCGGGGCTGGGATTTATCG
GCAACATCTACTCGCTAGCCGCCTCGGCCGAGCTCCCTCATATCTACATGAAAAAGCAGA
GCCAGGTGTACGGCGAGATCTTCAGCTTAGATCTTGGAGGTATATCAACTGTGGTTCTAA
ATGGCTATGATGTAGTAAAGGAATGCCTCGTTCATCAAAGTGAAATTTTTGCAGACAGAC
CATGCCTGCCTTTATTCATGAAGATGACAAAATGGGAGGGTTACTCAATTCCAGATATGG
CCGAGGATGGGTTGATCACAGAAGATTAGCTGTAAACAGCTTTCGCTCTTTTGGATATGG
CCAAAAGTCTTTTGAATCTAAAATCTTAGAAGAAACCAAATTTTTCATGGATGCTATTGA
AACATACAGTAGTAGACCTTTTGACTTTAAACAATTAATAACAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCCGCGGGGGTTCGCAGCCCCAGCTGCGGGCCATGTGGGAACCTCCCGGAGCTGAAGTGT
TCCCGGCGGCCCTTGGCGGCGTTCTCTTCTTGCTGCTCTTCGCCCTCGGGGTCCGCCAGC
TTTTGAAGCAGAGACGGCCGTCGGGCTTCCCCCCGGGACCGTCGGGGCTGGGATTTATCG
GCAACATCTACTCGCTAGCCGCCTCGGCCGAGCTCCCTCATATCTACATGAAAAAGCAGA
GCCAGGTGTACGGCGAGATCTTCAGCTTAGATCTTGGAGGTATATCAACTGTGGTTCTAA
ATGGCTATGATGTAGTAAAGGAATGCCTCGTTCATCAAAGTGAAATTTTTGCAGACAGAC
CATGCCTGCCTTTATTCATGAAGATGACAAAATGGGAGGGTTACTCAATTCCAGATATGG
CCGAGGATGGGTTGATCACAGAAGATTAGCTGTAAACAGCTTTCGCTCTTTTGGATATGG
CCAAAAGTCTTTTGAATCTAAAATCTTAGAAGAAACCAAATTTTTCATGGATGCTATTGA
AACATACAGTAGTAGACCTTTTGACTTTAAACAATTAATAACAA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               119-238, - strand, RNAz p=0.947215

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               119-238, - strand, RNAz p=0.947215

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               1-257, gnl|bosTau2|chr15 (22518026-22517770)
               

               
               1-257, gnl|Hg17|chr11 (14870361-14870103)
               

               
               1-257, gnl|Mm7|chr7 (110479086-110478830)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-257, gnl|bosTau2|chr15 (22518026-22517770)
               

               
               1-257, gnl|Hg17|chr11 (14870361-14870103)
               

               
               1-257, gnl|Mm7|chr7 (110479086-110478830)

	1-257, gnl\|bosTau2\|chr15 (22518026-22517770)
	1-257, gnl\|Hg17\|chr11 (14870361-14870103)
	1-257, gnl\|Mm7\|chr7 (110479086-110478830)