Non-Coding RNA Search

Pig2-139G20

Sequence:


               
               GTTGCAGCCCTGCCCACGGCAGACAGAGGGTCAGGGTGACCTCCTGGGCTTCCAACTGTA
CCATGACCACCTCCTCCCTGAGAGAGATGGCACCCCCACCCTTCGTGACCCATTCTCATG
TTTCATCAGCCCTCTCCTTCAAGAAGCCAAAACATATTGAGATGGGAAACCCTAAGCTGT
TGCTTCTTCTTGATTCCCGGGCCCCAGTAACCTGTGTCATGGGTTAGTTTTTGCAGTTTT
ATTTAGTTTTTGGCAATTTTTAGTGACCTCTGACACAGTTCTCAAAAAGGAGCTCCCAGC
CAGAAGCCACAATTAACTGGCCTCCTGGTGGGCAGTATCTGCAAAGAGGACAGGGGTTAA
ATGAACTAGAAAGACCTTGGCATCTCTTGCCAAGGGCAGAGGATGAAAGCCTGCATTCAC
AATGCCTAGGACATGCCTTCTGTGGGTAAATAAAGAGCCTTCATCTTCCCCTTCTAGCAG
CACTAAATTCCCTAGAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTTGCAGCCCTGCCCACGGCAGACAGAGGGTCAGGGTGACCTCCTGGGCTTCCAACTGTA
CCATGACCACCTCCTCCCTGAGAGAGATGGCACCCCCACCCTTCGTGACCCATTCTCATG
TTTCATCAGCCCTCTCCTTCAAGAAGCCAAAACATATTGAGATGGGAAACCCTAAGCTGT
TGCTTCTTCTTGATTCCCGGGCCCCAGTAACCTGTGTCATGGGTTAGTTTTTGCAGTTTT
ATTTAGTTTTTGGCAATTTTTAGTGACCTCTGACACAGTTCTCAAAAAGGAGCTCCCAGC
CAGAAGCCACAATTAACTGGCCTCCTGGTGGGCAGTATCTGCAAAGAGGACAGGGGTTAA
ATGAACTAGAAAGACCTTGGCATCTCTTGCCAAGGGCAGAGGATGAAAGCCTGCATTCAC
AATGCCTAGGACATGCCTTCTGTGGGTAAATAAAGAGCCTTCATCTTCCCCTTCTAGCAG
CACTAAATTCCCTAGAAAA

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               205-469, + strand, RNAz p=0.978696

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               205-469, + strand, RNAz p=0.978696

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               46-499, gnl|bosTau2|chr15 (47762303-47761847)
               

               
               46-499, gnl|Hg17|chr11 (45926101-45925642)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               46-499, gnl|bosTau2|chr15 (47762303-47761847)
               

               
               46-499, gnl|Hg17|chr11 (45926101-45925642)

	46-499, gnl\|bosTau2\|chr15 (47762303-47761847)
	46-499, gnl\|Hg17\|chr11 (45926101-45925642)