Non-Coding RNA Search

Pig2-139I21

Sequence:


               
               GCCGTCCTTCTAGCAGGGCGGGCTGGGCGGACCGCCGAGGCAGTCCTCGCCCGGGTATGG
GAAGCAGAGCGGCCACGGACATAGGCTGTGGCAAAGTTTCCCAGACGCGCGTATCAGGGC
GCGCGGCTGCCGACTACCCGTGACCGCTGCTAGAAAGGCTCGGAGATTTTCAATTTGGAA
GAAAAAAAAAAAAAAAAAGAACCCCCCCTCTTTCTTTTGGAAAGCTTTGTCTCCCGGGGG
CCAGGGGGGAAATCTCCAAACTGGGGCACGGGGGTTCCACCGCCAAAGGGCCGGGCTTTG
GAAAACGTCAGGCTTTGGAAACTAAGGGGGTGGGGCCCCCTGGGGCCCCGGACTTCCTAG
GGGGGGTAAGCCCGGGGGAACCCGGGGGGCCCGGAAAGGAGGATCCCCCG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCCGTCCTTCTAGCAGGGCGGGCTGGGCGGACCGCCGAGGCAGTCCTCGCCCGGGTATGG
GAAGCAGAGCGGCCACGGACATAGGCTGTGGCAAAGTTTCCCAGACGCGCGTATCAGGGC
GCGCGGCTGCCGACTACCCGTGACCGCTGCTAGAAAGGCTCGGAGATTTTCAATTTGGAA
GAAAAAAAAAAAAAAAAAGAACCCCCCCTCTTTCTTTTGGAAAGCTTTGTCTCCCGGGGG
CCAGGGGGGAAATCTCCAAACTGGGGCACGGGGGTTCCACCGCCAAAGGGCCGGGCTTTG
GAAAACGTCAGGCTTTGGAAACTAAGGGGGTGGGGCCCCCTGGGGCCCCGGACTTCCTAG
GGGGGGTAAGCCCGGGGGAACCCGGGGGGCCCGGAAAGGAGGATCCCCCG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               292-410, + strand, RNAz p=0.527264

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               292-410, + strand, RNAz p=0.527264

Predicted microRNA(s): 1 entry(ies)

More info

Predicted microRNA(s): 1 entry(ies)

Help | Less info


               
               339-419, + strand, RNAmicro p=0.997787

Predicted microRNA(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro


               
               339-419, + strand, RNAmicro p=0.997787

Homologous human UTR: 1 entry(ies)

More info

Homologous human UTR: 1 entry(ies)

Help | Less info


               
               3' of NM_198516, +

Homologous human UTR: 1 entry(ies)

Help | Less info

Human gene identifier and UTR site,
human gene reading direction


               
               3' of NM_198516, +

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               1-410, gnl|bosTau2|chr15 (27619408-27619021)
               

               
               1-410, gnl|Hg17|chr11 (11600128-11599746)
               

               
               1-410, gnl|Mm7|chr7 (107695506-107695103)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-410, gnl|bosTau2|chr15 (27619408-27619021)
               

               
               1-410, gnl|Hg17|chr11 (11600128-11599746)
               

               
               1-410, gnl|Mm7|chr7 (107695506-107695103)

	1-410, gnl\|bosTau2\|chr15 (27619408-27619021)
	1-410, gnl\|Hg17\|chr11 (11600128-11599746)
	1-410, gnl\|Mm7\|chr7 (107695506-107695103)