Pig2-139O13
Sequence: | Distiller database | More info |
Sequence: | Distiller database | Help | Less info |
ATTATGAGACAGAAGGTTAGGCCCTTGGATTCTCAGCCCACAAATCCTGGCGAGGAGGCG ATGTGGGTACATGAACTTTCCAGAGATTGCTGGAGAAGAAATCACCTGCTAATCACTGCA TTCTGCTGGTTGGATGTGGAAGGAATAGGATTTTCCTCAAACCTCAGTTTTTTGTTTTTC GTTTTTTTGTTTGTTTGTTTGTTTGTTTGTTTTTTAACCACAGATACATGTGGCAGCACC AGAGAAAACTGACGGTAACCAATTGTCTCTGAGCTTTTGTTCAGGCCCCTTTTCTGCTGG GCGAGGCTACGCAATTACTGGCGCCCATAGATGGCTGATTGTCCATGTGACACTAGGCTG ACTTTGATCTACAGACATGATATCATCGGCAGGGCGCGCCCAGTGCCAAACTACTGCATT CTTTTGACCAAAACAGTGGTTTTGTGCAACCTCACGGATGCAGGCTAAAGAGCTTGAGAG CGGGCCTGTGTCTCCACAAACAGGCGTGACCATACTT |
Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
ATTATGAGACAGAAGGTTAGGCCCTTGGATTCTCAGCCCACAAATCCTGGCGAGGAGGCG ATGTGGGTACATGAACTTTCCAGAGATTGCTGGAGAAGAAATCACCTGCTAATCACTGCA TTCTGCTGGTTGGATGTGGAAGGAATAGGATTTTCCTCAAACCTCAGTTTTTTGTTTTTC GTTTTTTTGTTTGTTTGTTTGTTTGTTTGTTTTTTAACCACAGATACATGTGGCAGCACC AGAGAAAACTGACGGTAACCAATTGTCTCTGAGCTTTTGTTCAGGCCCCTTTTCTGCTGG GCGAGGCTACGCAATTACTGGCGCCCATAGATGGCTGATTGTCCATGTGACACTAGGCTG ACTTTGATCTACAGACATGATATCATCGGCAGGGCGCGCCCAGTGCCAAACTACTGCATT CTTTTGACCAAAACAGTGGTTTTGTGCAACCTCACGGATGCAGGCTAAAGAGCTTGAGAG CGGGCCTGTGTCTCCACAAACAGGCGTGACCATACTT |
Predicted RNA structure(s): 2 entry(ies) | More info |
Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
382-517, - strand, RNAz p=0.97155 | |
408-516, + strand, RNAz p=0.684256 |
Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
382-517, - strand, RNAz p=0.97155 | |
408-516, + strand, RNAz p=0.684256 |
Aligned organism(s): 26 entry(ies) | More info |
Aligned organism(s): 26 entry(ies) | Help | Less info |
1-188, gnl|bosTau2|chr19 (39734627-39734807) | |
1-188, gnl|canFam2|chr9 (14160939-14161628) | |
1-188, gnl|dasNov1|scaffold_36781 (46221-45522) | |
1-188, gnl|echTel1|scaffold_316773 (43036-42346) | |
1-188, gnl|hg17|chr17 (58322528-58323254) | |
1-188, gnl|Hg17|chr17 (58322730-58322924) | |
1-188, gnl|loxAfr1|scaffold_13480 (5614-4902) | |
1-188, gnl|mm7|chr11 (105632980-105633697) | |
1-188, gnl|Mm7|chr11 (105633168-105633355) | |
1-188, gnl|monDom2|scaffold_18 (37097403-37096694) | |
1-188, gnl|oryCun1|scaffold_213520 (67987-68691) | |
1-188, gnl|panTro1|chr19 (46828847-46828117) | |
1-188, gnl|rheMac2|chr16 (58402404-58403135) | |
1-188, gnl|rn3|chr10 (94939080-94939813) | |
344-517, gnl|bosTau2|chr19 (39735881-39736054) | |
344-517, gnl|canFam2|chr9 (14162528-14162837) | |
344-517, gnl|dasNov1|scaffold_36781 (44864-44529) | |
344-517, gnl|hg17|chr17 (58323903-58324241) | |
344-517, gnl|Hg17|chr17 (58323987-58324166) | |
344-517, gnl|loxAfr1|scaffold_13480 (4040-3708) | |
344-517, gnl|mm7|chr11 (105634569-105634893) | |
344-517, gnl|Mm7|chr11 (105634644-105634820) | |
344-517, gnl|oryCun1|scaffold_213520 (69338-69670) | |
344-517, gnl|panTro1|chr19 (46827460-46827124) | |
344-517, gnl|rheMac2|chr16 (58403766-58404104) | |
344-517, gnl|rn3|chr10 (94940675-94940999) |
Aligned organism(s): 26 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
1-188, gnl|bosTau2|chr19 (39734627-39734807) | |
1-188, gnl|canFam2|chr9 (14160939-14161628) | |
1-188, gnl|dasNov1|scaffold_36781 (46221-45522) | |
1-188, gnl|echTel1|scaffold_316773 (43036-42346) | |
1-188, gnl|hg17|chr17 (58322528-58323254) | |
1-188, gnl|Hg17|chr17 (58322730-58322924) | |
1-188, gnl|loxAfr1|scaffold_13480 (5614-4902) | |
1-188, gnl|mm7|chr11 (105632980-105633697) | |
1-188, gnl|Mm7|chr11 (105633168-105633355) | |
1-188, gnl|monDom2|scaffold_18 (37097403-37096694) | |
1-188, gnl|oryCun1|scaffold_213520 (67987-68691) | |
1-188, gnl|panTro1|chr19 (46828847-46828117) | |
1-188, gnl|rheMac2|chr16 (58402404-58403135) | |
1-188, gnl|rn3|chr10 (94939080-94939813) | |
344-517, gnl|bosTau2|chr19 (39735881-39736054) | |
344-517, gnl|canFam2|chr9 (14162528-14162837) | |
344-517, gnl|dasNov1|scaffold_36781 (44864-44529) | |
344-517, gnl|hg17|chr17 (58323903-58324241) | |
344-517, gnl|Hg17|chr17 (58323987-58324166) | |
344-517, gnl|loxAfr1|scaffold_13480 (4040-3708) | |
344-517, gnl|mm7|chr11 (105634569-105634893) | |
344-517, gnl|Mm7|chr11 (105634644-105634820) | |
344-517, gnl|oryCun1|scaffold_213520 (69338-69670) | |
344-517, gnl|panTro1|chr19 (46827460-46827124) | |
344-517, gnl|rheMac2|chr16 (58403766-58404104) | |
344-517, gnl|rn3|chr10 (94940675-94940999) |