Non-Coding RNA Search

Pig2-141L03

Sequence:


               
               ATATAACTTGTGAAGAGAGGATTTATGTTTTTTTCTTAATAAACAAGTCTTTTTCAGACA
CAACTTCTGAATATCTCAGAAGCCTTTTGACTTGAAATGTCAAATTCTTTACTTAAGTAC
CTTCAAAAGCCTTTGAAAAATATATTTATTTAACCCCGGGACTAGAGAAGTAGACAAATA
AGGATATGGATTTTGGGTGACTCTAAATCTTTCTTCAAAGATTAAAAATATCATTGAGTT
GGAGAAGGGGGATGATCTCCTGGTGAGTAGGTAGCCTCTTTTTAAATAAACATGCCTAAC
AGAAACATTCGTATTTCACAGTTCAGAGAGTAAGTTTTCATAAACCATCAAAGGGAAGAA
GTAGTTGAGCTAAAGTCATACTGGAGGTGAAAGTGGGGTGAACTATAAAGAAGGATTCTG
AAAGTAATCTCCTGGTCCCTGGAGGCTGTGAAGAATCTCATATTCCCTAGAGTAAGGATA
AAAGTTAGCTTTGAAGAGACTAAATTTTACTGCTGAAAGTTTACATGTTTGAGGGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATATAACTTGTGAAGAGAGGATTTATGTTTTTTTCTTAATAAACAAGTCTTTTTCAGACA
CAACTTCTGAATATCTCAGAAGCCTTTTGACTTGAAATGTCAAATTCTTTACTTAAGTAC
CTTCAAAAGCCTTTGAAAAATATATTTATTTAACCCCGGGACTAGAGAAGTAGACAAATA
AGGATATGGATTTTGGGTGACTCTAAATCTTTCTTCAAAGATTAAAAATATCATTGAGTT
GGAGAAGGGGGATGATCTCCTGGTGAGTAGGTAGCCTCTTTTTAAATAAACATGCCTAAC
AGAAACATTCGTATTTCACAGTTCAGAGAGTAAGTTTTCATAAACCATCAAAGGGAAGAA
GTAGTTGAGCTAAAGTCATACTGGAGGTGAAAGTGGGGTGAACTATAAAGAAGGATTCTG
AAAGTAATCTCCTGGTCCCTGGAGGCTGTGAAGAATCTCATATTCCCTAGAGTAAGGATA
AAAGTTAGCTTTGAAGAGACTAAATTTTACTGCTGAAAGTTTACATGTTTGAGGGG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               379-486, + strand, RNAz p=0.869515

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               379-486, + strand, RNAz p=0.869515

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-533, gnl|bosTau2|chr2 (3082996-3083531)
               

               
               1-533, gnl|Hg17|chr2 (189740759-189740225)
               

               
               1-533, gnl|Mm7|chr1 (45625964-45625474)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-533, gnl|bosTau2|chr2 (3082996-3083531)
               

               
               1-533, gnl|Hg17|chr2 (189740759-189740225)
               

               
               1-533, gnl|Mm7|chr1 (45625964-45625474)

	1-533, gnl\|bosTau2\|chr2 (3082996-3083531)
	1-533, gnl\|Hg17\|chr2 (189740759-189740225)
	1-533, gnl\|Mm7\|chr1 (45625964-45625474)