Non-Coding RNA Search

Pig2-142G17

Sequence:


               
               AATTGATCACTTTTGTATCTCAAGGGCCTCTGTGGCTGTGCCGGGACCAGAAGATGGCAT
TGTATGCAGGATAACAAAGCGCTGTTTCTAGAGATGCATTTCAGGGATAGGAAAATAGCT
CTGTGTGTCACAGAATGTTCTTCAGACAGCTATTTTCTCAGGGTGGGGGTGGGGATTTTT
ACCTGCAAGGAAGTCTGATAGTGAGGACCTTTCCAGTTTGCAGATCTTCCTCATTCCTGG
TCAATAACGCCCTAGCTCAGCGCCCTAGCTCAGCAAAATGCCTCCTCCGCGACACTCCCC
AGCCCTCCCACCCACCGAACAAACAAAAAAAACAAAAACCGCCTGGGGAGAAACTTTTCC
TTTAAGTTGGTTTCCACGTTCCAGTCTCCTTCCTCCCTTCTCTTAATCTGCATGCTTAAG
AGTCTTTTAAAAAGAGTGGTTTAGGAGTAAAACCCTCTTTATGAGGGACCACCCACATAG
CCTGGGAATTCGGGAAGCTGAGACAGACTTTAGAACTGAAACGCAGTAACTGTACAAATG
CCAAGTTTCAGGTGTCATTACCTCCCCTCGTTCTCTAAAGAATTTCTAATCTCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AATTGATCACTTTTGTATCTCAAGGGCCTCTGTGGCTGTGCCGGGACCAGAAGATGGCAT
TGTATGCAGGATAACAAAGCGCTGTTTCTAGAGATGCATTTCAGGGATAGGAAAATAGCT
CTGTGTGTCACAGAATGTTCTTCAGACAGCTATTTTCTCAGGGTGGGGGTGGGGATTTTT
ACCTGCAAGGAAGTCTGATAGTGAGGACCTTTCCAGTTTGCAGATCTTCCTCATTCCTGG
TCAATAACGCCCTAGCTCAGCGCCCTAGCTCAGCAAAATGCCTCCTCCGCGACACTCCCC
AGCCCTCCCACCCACCGAACAAACAAAAAAAACAAAAACCGCCTGGGGAGAAACTTTTCC
TTTAAGTTGGTTTCCACGTTCCAGTCTCCTTCCTCCCTTCTCTTAATCTGCATGCTTAAG
AGTCTTTTAAAAAGAGTGGTTTAGGAGTAAAACCCTCTTTATGAGGGACCACCCACATAG
CCTGGGAATTCGGGAAGCTGAGACAGACTTTAGAACTGAAACGCAGTAACTGTACAAATG
CCAAGTTTCAGGTGTCATTACCTCCCCTCGTTCTCTAAAGAATTTCTAATCTCT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               270-388, - strand, RNAz p=0.782993

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               270-388, - strand, RNAz p=0.782993

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-445, gnl|bosTau2|chr23 (24034330-24033913)
               

               
               1-445, gnl|Mm7|chr17 (35170097-35169696)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-445, gnl|bosTau2|chr23 (24034330-24033913)
               

               
               1-445, gnl|Mm7|chr17 (35170097-35169696)

	1-445, gnl\|bosTau2\|chr23 (24034330-24033913)
	1-445, gnl\|Mm7\|chr17 (35170097-35169696)