Non-Coding RNA Search

Pig2-142H06

Sequence:


               
               GTCCTTGGAAGGCTGTTCGCCAGGAGGGCCTANCTCCTGCTGCCTGTTCAGATTCGGGGA
GGGGACTGGAACGCAACATCTTCCCCTTGTCTGTTCCTGGGATGTCAAGACTGCTGTGCA
TCTTTTATGAGTAACCTAGTTCTGTCAAGAGAGCTGCAGCATTTCACTCAAGTACTTGCA
TGCTCGTAGGGATGCATGCTTATAGGTCTGCATGCACCCCAGCACCCCGACTTCCATCAG
GACAGGGATTCTCCAGTCCCCCTAATGTCTGCGTCCAGAGCGATTTCCACCCATGTGCTT
CACGCACACAGTTTTCGTGCCCTGTAGGAGAGACAGTGACCATGCCAGGCTCTGCAAATA
CAGACTCTTGTATTCCTGATTTCTGAATTACCTGAAGCTACACCCGCATCTCCATGGCAC
GGAATCACTTCTCCACAAAGGCTGCAGTTAGGAGAGGCACAGGTTGCANAGCTCGGGAGA
AGGGGTGCTGAGGAGCTANCTAGTTCTTCAGACTCGCCAGCAACCTTCCTTGGATTTGAG
ATGCTGTACATG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTCCTTGGAAGGCTGTTCGCCAGGAGGGCCTANCTCCTGCTGCCTGTTCAGATTCGGGGA
GGGGACTGGAACGCAACATCTTCCCCTTGTCTGTTCCTGGGATGTCAAGACTGCTGTGCA
TCTTTTATGAGTAACCTAGTTCTGTCAAGAGAGCTGCAGCATTTCACTCAAGTACTTGCA
TGCTCGTAGGGATGCATGCTTATAGGTCTGCATGCACCCCAGCACCCCGACTTCCATCAG
GACAGGGATTCTCCAGTCCCCCTAATGTCTGCGTCCAGAGCGATTTCCACCCATGTGCTT
CACGCACACAGTTTTCGTGCCCTGTAGGAGAGACAGTGACCATGCCAGGCTCTGCAAATA
CAGACTCTTGTATTCCTGATTTCTGAATTACCTGAAGCTACACCCGCATCTCCATGGCAC
GGAATCACTTCTCCACAAAGGCTGCAGTTAGGAGAGGCACAGGTTGCANAGCTCGGGAGA
AGGGGTGCTGAGGAGCTANCTAGTTCTTCAGACTCGCCAGCAACCTTCCTTGGATTTGAG
ATGCTGTACATG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               122-275, - strand, RNAz p=0.909745

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               122-275, - strand, RNAz p=0.909745

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               8-534, gnl|bosTau2|chr3 (25957816-25958332)
               

               
               8-534, gnl|Hg17|chr1 (109760377-109759855)
               

               
               8-534, gnl|Mm7|chr3 (108008572-108009110)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               8-534, gnl|bosTau2|chr3 (25957816-25958332)
               

               
               8-534, gnl|Hg17|chr1 (109760377-109759855)
               

               
               8-534, gnl|Mm7|chr3 (108008572-108009110)

	8-534, gnl\|bosTau2\|chr3 (25957816-25958332)
	8-534, gnl\|Hg17\|chr1 (109760377-109759855)
	8-534, gnl\|Mm7\|chr3 (108008572-108009110)