Pig2-145L15
|
GCAGAGGGGCTCTCGGCTGCTTCCATTTTTGAAGTCTCATTGTGGCTCCCTAGAGCTATT
TGAAAAAGGAGATTCTGGCTTAAAATTAAGAACCAGAAAACAATTGGAAAAAGAATTTTG
ATTGAGTACATGCTATATGCCAGTAGTACACTAGTCTGGGTTTGTTTGTTTGGTTGGTTG
TTGTTGTTGTTTTTTACACAGATGTAGATGACGGACTTCCATGTTAAGGGCAAAAACGTA
CTTTGTACAAAGTGTATTTTAGCTCGGCCTGCCTTCTGTAGCTCCTGTAACTACCAGCAG
TGGTGAACTGAATACTAGATCAATTTCTACCTTCATACTCAAAACAGTCATGTCCAACTC
TGGGGGAAAAAAAAGCA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GCAGAGGGGCTCTCGGCTGCTTCCATTTTTGAAGTCTCATTGTGGCTCCCTAGAGCTATT
TGAAAAAGGAGATTCTGGCTTAAAATTAAGAACCAGAAAACAATTGGAAAAAGAATTTTG
ATTGAGTACATGCTATATGCCAGTAGTACACTAGTCTGGGTTTGTTTGTTTGGTTGGTTG
TTGTTGTTGTTTTTTACACAGATGTAGATGACGGACTTCCATGTTAAGGGCAAAAACGTA
CTTTGTACAAAGTGTATTTTAGCTCGGCCTGCCTTCTGTAGCTCCTGTAACTACCAGCAG
TGGTGAACTGAATACTAGATCAATTTCTACCTTCATACTCAAAACAGTCATGTCCAACTC
TGGGGGAAAAAAAAGCA
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
9-157, gnl|bosTau2|chr29 (20551875-20552022) |
|
9-157, gnl|canFam2|chr5 (12379363-12379084) |
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9-157, gnl|dasNov1|scaffold_14265 (21361-21587) |
|
9-157, gnl|echTel1|scaffold_264163 (1025-1263) |
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9-157, gnl|hg17|chr11 (124471672-124471947) |
|
9-157, gnl|Hg17|chr11 (124471819-124471671) |
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9-157, gnl|loxAfr1|scaffold_46957 (11117-11391) |
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9-157, gnl|mm7|chr9 (37152624-37152394) |
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9-157, gnl|monDom2|scaffold_15 (10847058-10847339) |
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9-157, gnl|oryCun1|scaffold_202687 (51428-51693) |
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9-157, gnl|panTro1|chr9 (126555450-126555725) |
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9-157, gnl|rheMac2|chr14 (123244262-123244537) |
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9-157, gnl|rn3|chr8 (38484184-38483929) |
| |
|
197-374, gnl|bosTau2|chr29 (20552071-20552249) |
|
197-374, gnl|Hg17|chr11 (124470789-124470603) |
|
197-374, gnl|Mm7|chr9 (37154876-37155051) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
9-157, gnl|bosTau2|chr29 (20551875-20552022) |
|
9-157, gnl|canFam2|chr5 (12379363-12379084) |
|
9-157, gnl|dasNov1|scaffold_14265 (21361-21587) |
|
9-157, gnl|echTel1|scaffold_264163 (1025-1263) |
|
9-157, gnl|hg17|chr11 (124471672-124471947) |
|
9-157, gnl|Hg17|chr11 (124471819-124471671) |
|
9-157, gnl|loxAfr1|scaffold_46957 (11117-11391) |
|
9-157, gnl|mm7|chr9 (37152624-37152394) |
|
9-157, gnl|monDom2|scaffold_15 (10847058-10847339) |
|
9-157, gnl|oryCun1|scaffold_202687 (51428-51693) |
|
9-157, gnl|panTro1|chr9 (126555450-126555725) |
|
9-157, gnl|rheMac2|chr14 (123244262-123244537) |
|
9-157, gnl|rn3|chr8 (38484184-38483929) |
| |
|
197-374, gnl|bosTau2|chr29 (20552071-20552249) |
|
197-374, gnl|Hg17|chr11 (124470789-124470603) |
|
197-374, gnl|Mm7|chr9 (37154876-37155051) |
